DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3609 and gfod2

DIOPT Version :9

Sequence 1:NP_001188684.1 Gene:CG3609 / 33421 FlyBaseID:FBgn0031418 Length:335 Species:Drosophila melanogaster
Sequence 2:NP_001071214.2 Gene:gfod2 / 777639 ZFINID:ZDB-GENE-061103-64 Length:367 Species:Danio rerio


Alignment Length:348 Identity:71/348 - (20%)
Similarity:128/348 - (36%) Gaps:97/348 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 VQAVAARALDRAQEFATKHGIPKALGSYEELAKSTDVDVVYIGTLNPQHYEVALLMLNNGKHVLC 97
            ||||..|..:.|:..|::..||.:....:::....:|.:|.|.|..|...::|:..|..||:|:.
Zfish    28 VQAVWGRTQEEAESLASELDIPFSTSQTDDVLLHPEVHLVCILTPPPHTRQIAVKALGIGKNVIS 92

  Fly    98 EKPLAMNKKQVEGILAAAKANKRFFMEAV-----WSRFFPSYQRVKELISSGQLGQVKDVEV--- 154
            |:...:. ...:.:.||     |::.:.:     ..||.|::..:|.|:..|..|.::..|.   
Zfish    93 EQAATLT-DACKMVTAA-----RYYPQLMSIMGNSLRFLPAFVHMKRLLGEGYCGSLQVCEARVY 151

  Fly   155 -------NFGFPMPHVDRLQKRELGGG-------VVYDL-------------------------- 179
                   ::|:....:       :|||       .:.||                          
Zfish   152 GGSLLSQSYGWAWEEL-------MGGGGLHTVGSCIIDLLSHLTGCRAVRVHGMLRTFVRQGGPA 209

  Fly   180 -GIYTIQVSQWA-FQEKPEKIESKG-----TLNAEGIDDDV-SATLTYSGGRTA---------RM 227
             ||.::....:| ||    .:.|.|     |||......|| ...|..|.||..         |:
Zfish   210 GGIRSVTADDYACFQ----LLMSGGAVCSVTLNFNLPGTDVHEIMLVGSSGRLVARGTELFGQRI 270

  Fly   228 RFSSKEKL---GNTAV---IKGTKGQVTLIDFWSPNKLIDIDGQE--KEWLPPKGKYATNYANSE 284
            ...::|.|   |..|.   ::|....||.:       .:....||  :.|.......|.::.:..
Zfish   271 NMQAEELLLSDGGEATGPSVRGLNSMVTQL-------RLSFQAQEDRRSWARHPVSMAASFEDGL 328

  Fly   285 AMRYEAEAVRQSIIAGEVENKNV 307
            .::...:|:::|...||.|:..|
Zfish   329 YVQTVVDAIKRSNRTGEWESVEV 351

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3609NP_001188684.1 MviM 5..292 CDD:223745 65/331 (20%)
GFO_IDH_MocA 5..123 CDD:279716 23/89 (26%)
GFO_IDH_MocA_C 138..>198 CDD:304482 16/104 (15%)
gfod2NP_001071214.2 MviM 5..350 CDD:223745 70/345 (20%)
NADB_Rossmann 5..109 CDD:304358 22/86 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0673
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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