DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3597 and ycjS

DIOPT Version :10

Sequence 1:NP_001259930.1 Gene:CG3597 / 33420 FlyBaseID:FBgn0031417 Length:337 Species:Drosophila melanogaster
Sequence 2:NP_415831.1 Gene:ycjS / 948589 ECOCYCID:G6653 Length:351 Species:Escherichia coli


Alignment Length:218 Identity:66/218 - (30%)
Similarity:97/218 - (44%) Gaps:26/218 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LNWGIAAAGRITQDFVTALGTVEKSRHVVVAVADVDGQRAQQFAQRNQIPRHYDGFDALALDREV 71
            |...|..||::. |.|.|.....::...:|||.|....:||..|::......:|...|:.|..:.
E. coli    10 LRVAIIGAGQVA-DKVHASYYCTRNDLELVAVCDSRLSQAQALAEKYGNASVWDDPQAMLLAVKP 73

  Fly    72 EVVYVGTLNPFHYAVVHLMLARGKNVLCETPMCLSVEQAKELYTLAEQRGVFLMEGNSMWSRFFP 136
            :||.|.:.|.|||....:.|..|.:|:||.|..::.|||:|:...|.:.|..|  ......||..
E. coli    74 DVVSVCSPNRFHYEHTLMALEAGCHVMCEKPPAMTPEQAREMCDTARKLGKVL--AYDFHHRFAL 136

  Fly   137 SYDRLRELLKNDVIGEVTQVKVQHGFRLAHMERVC---------NRSL-GGSILMDIGIYALQLG 191
            ...:|||.:.|.|:||:.       ...|...|.|         |:.| ||..|:||||:.|...
E. coli   137 DTQQLREQVTNGVLGEIY-------VTTARALRRCGVPGWGVFTNKELQGGGPLIDIGIHMLDAA 194

  Fly   192 QFVFGVSPVKILPS------GTQ 208
            .:|.|...||.:.:      |||
E. coli   195 MYVLGFPAVKSVNAHSFQKIGTQ 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3597NP_001259930.1 MviM 7..253 CDD:440437 66/218 (30%)
ycjSNP_415831.1 MviM 7..351 CDD:440437 66/218 (30%)

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