DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3597 and Gfod2

DIOPT Version :9

Sequence 1:NP_001259930.1 Gene:CG3597 / 33420 FlyBaseID:FBgn0031417 Length:337 Species:Drosophila melanogaster
Sequence 2:NP_001355314.1 Gene:Gfod2 / 70575 MGIID:1917825 Length:425 Species:Mus musculus


Alignment Length:421 Identity:76/421 - (18%)
Similarity:138/421 - (32%) Gaps:137/421 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 WGIAAAGRITQDFVTALG-TVEKSRHVVVAVADVDGQRAQQFAQRNQIPRHYDGFDALALDREVE 72
            :|..::.|:....:.|.| |||       |:.....:.|:|.|:...|..:....|.:.|.::|:
Mouse    10 FGTGSSARVLVPLLRAEGFTVE-------ALWGKTEEEAKQLAEEMNITFYTSRTDDVLLHQDVD 67

  Fly    73 VVYVGTLNPFH--------YAVVHLMLAR--------------------------------GKNV 97
            :|.:....|..        ..||.|.|:.                                ||||
Mouse    68 LVCINIPPPLTRQISVKALAPVVKLQLSGEEQEVEGDPGLTSLDAVTPYSTGAPCCSRKGIGKNV 132

  Fly    98 LCETPMCLSVEQAKELYTLAEQRGVFLMEGNSMWSRFFPSYDRLRELLKNDVIGEV--TQVKVQH 160
            :|| ....|::..:.:........:..:.||.:  ||.|::.|:::|:....:|.|  ...::..
Mouse   133 VCE-KAATSMDAFRMVTASRYYPQLMSLVGNVL--RFLPAFVRMKQLIAEHYVGAVMICDARIYS 194

  Fly   161 GFRLA-HMERVCNRSLGGSILMDIGIYALQLGQFVFGVSPVKI---------------------- 202
            |..|: ....:|:..:||..|..:|.|.:.|...:.|....|:                      
Mouse   195 GSLLSPSYGWICDELMGGGGLHTMGTYIVDLLTHLTGQKAEKVHGLLKTFVRQNATIRGIRHVTS 259

  Fly   203 -------------LPSGTQLNKERVDVQIDFMLDYGDGRRLVALVTGL----------ENLENDA 244
                         :.|...||.......:..::..|...||||....|          |.|..|:
Mouse   260 DDFCFFQMLMGGGVCSTVTLNFNMPGAFVHEVMVVGSAGRLVARGADLYGQKNSAAQEELLVRDS 324

  Fly   245 VITGTKGEIKLSNYWCCTQISRSNAP---PESWPLPRAKFDFHYTNTCGLRYEAEEVRRCI---- 302
            :..|                  :..|   |:..||...|         |:.|..:.:|:..    
Mouse   325 LAVG------------------AGLPEQGPQDVPLLYLK---------GMVYMVQALRQSFQGQG 362

  Fly   303 EKRLLESPKFTHAESLE----LAAIADEIRR 329
            ::|..:....:.|.|.|    :.::.|.|:|
Mouse   363 DRRTWDRTPVSMAASFEDGLYMQSVVDAIKR 393

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3597NP_001259930.1 MviM 7..332 CDD:223745 76/421 (18%)
GFO_IDH_MocA 7..127 CDD:279716 28/158 (18%)
GFO_IDH_MocA_C 142..228 CDD:304482 18/123 (15%)
Gfod2NP_001355314.1 MviM 7..404 CDD:223745 76/421 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0673
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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