DRSC/TRiP Functional Genomics Resources

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Protein Alignment Axud1 and csrnp1

DIOPT Version :9

Sequence 1:NP_001259928.1 Gene:Axud1 / 33419 FlyBaseID:FBgn0261647 Length:852 Species:Drosophila melanogaster
Sequence 2:NP_001072461.1 Gene:csrnp1 / 779916 XenbaseID:XB-GENE-941566 Length:574 Species:Xenopus tropicalis


Alignment Length:650 Identity:177/650 - (27%)
Similarity:265/650 - (40%) Gaps:170/650 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   231 DGGSDSGLGSETSALLKDQAEKEAEPEIQKKVETKPIRSNLKRRLEDSESDAIDLVPDMSAPPVA 295
            |....|...|.:|:|....::.:                      ||...||...:.|.:  |.:
 Frog    20 DSNYSSSSASPSSSLTSSGSDSD----------------------EDYSHDAKLFITDFT--PTS 60

  Fly   296 PQKRTKR----SINFDEVKVFYFPRQQGFSCVPTAGGCTLGMGARHVGFKTMTLAEHAAELRRAH 356
            ..|:.||    .:.||.|.||||.|.|||:.||:.|||||||..||...:..||.|.:.|.....
 Frog    61 ILKKEKRFKKNKVLFDRVVVFYFQRCQGFTSVPSRGGCTLGMKRRHSYSRQYTLEEFSKEQLSRR 125

  Fly   357 RSQNQE-------------LQPRGS---------SSDDSEESEEDYLSEGSGSDAEDGSNGFLQP 399
            |.:.:|             |...|:         |.||..:.:.|.    :|::.|||.:..:.|
 Frog   126 REKLKERLKEEKLESLRNMLTLNGTIVSQKANNLSIDDICDEDIDM----NGAEVEDGFSPRMYP 186

  Fly   400 VTPKQRRALLKAAGVRKIDASEKSECRDIRNSREVCGCSCREFCDPETCACSQAGIKCQVDRAMF 464
              |::||||||..||:|||.|||.|..:||.|||.|||:|::||:||||:|:.||||||.|.:||
 Frog   187 --PRERRALLKREGVKKIDKSEKHELNEIRRSREDCGCNCQDFCEPETCSCTIAGIKCQRDHSMF 249

  Fly   465 PCGCTREACGNTVGRVEFNPTRVRTHYIHTVMRLDLEQR-QGSVQGVQGGHLQPQQQQPSQQTIG 528
            |||||::.|||..||||||.:||:||::||||||:||:: |.:.:.::......::..|    ..
 Frog   250 PCGCTKDGCGNRNGRVEFNSSRVQTHFLHTVMRLELEEKHQNNDRKLEAEDSANERLNP----FA 310

  Fly   529 YSPVGTAGSTSAYFLQTQSNYSSGYASPAYTPESSVSYYQQQVQQPGVPTAGQLIPQQQQAQSQS 593
            ..|||                 .|.:....||.:....:...::..|..:...            
 Frog   311 GVPVG-----------------KGSSEERATPLTPAFQFSMDIEVAGDDSCSS------------ 346

  Fly   594 YAGYAQLDSLDSGLFASGSNATPSYGELYQSLSYGSTQI---TSYTA--------AYQQHSASPA 647
                   |..|:   :|.||.:....|.|::.|...:|:   ..|.|        .|:::|:...
 Frog   347 -------DMTDT---SSSSNQSEDSEEPYEAASSDKSQLDVDDDYLARILHFNDSEYEENSSDCQ 401

  Fly   648 VAVAPGAPSS--C-----AYSSCAVPSVPPYGNA-TTTASSNVPYQTTAVSMTAASTSASPSRLV 704
            ..::...|:.  |     ..|....|:..||.:: ......|.....:..|...||.:.|.    
 Frog   402 DNLSFFHPTDFFCDNVYQPISGTDKPASGPYSSSFPKCIDDNANQDASCFSDEVASLTTSD---- 462

  Fly   705 GNPVGSATASPATVSSSPATASGNEFISLSTPIASSSRLSQINDLLQHNRNTTAALVAVSEGLSG 769
                     .|:..|||.|.:....:..:|   .||..|........:|.               
 Frog   463 ---------GPSDYSSSQAESHSKSYTDIS---LSSDSLDLFQAYPDYNL--------------- 500

  Fly   770 GRTSSSASTIDSIDT--------PPIVDDGQQRGCM------SFEALPPPLVNPAPIVAVVENKL 820
            |...:|....:::|.        |.|...|.|..|.      ..|::|.   .|.|.   .:|:|
 Frog   501 GPLYNSLKEYENLDNLSFQLPTFPGIAPSGDQTTCFLESLIGLSESIPD---TPVPF---TDNQL 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Axud1NP_001259928.1 CSRNP_N 301..500 CDD:292638 106/224 (47%)
PHA03255 643..>786 CDD:165513 25/158 (16%)
csrnp1NP_001072461.1 CSRNP_N 73..286 CDD:374302 104/218 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 215 1.000 Domainoid score I2660
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001585
OrthoInspector 1 1.000 - - otm47793
Panther 1 1.100 - - O PTHR13580
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1316
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
66.010

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