DRSC/TRiP Functional Genomics Resources

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Protein Alignment Axud1 and Csrnp3

DIOPT Version :9

Sequence 1:NP_001259928.1 Gene:Axud1 / 33419 FlyBaseID:FBgn0261647 Length:852 Species:Drosophila melanogaster
Sequence 2:XP_038960765.1 Gene:Csrnp3 / 311093 RGDID:1306214 Length:635 Species:Rattus norvegicus


Alignment Length:696 Identity:196/696 - (28%)
Similarity:294/696 - (42%) Gaps:141/696 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   190 LLWLKLNNETEMATRSAEVVSNNQASLEPAQPAKPKEDEL-RDGGSDSGLGSETSALLKDQAE-- 251
            ::.|:|:..:....:|....::....|.|        ||| :.|..||  .:..|.:||.:.|  
  Rat     8 IVQLRLSRSSRSRQKSHSTFNSINVVLVP--------DELTKKGTCDS--AAAMSGILKRKFEDV 62

  Fly   252 ---------KEAEPEIQKKVETKPIRSNLKRRLEDSES-DAIDLVPDMSAPPVAPQKRTKR---- 302
                     :|::.|:...              |.::| |:::........|.:..||.||    
  Rat    63 EASSPCSSARESDDEVSSS--------------ESADSGDSVNPSTSNHFTPSSILKREKRLRTK 113

  Fly   303 SINFDEVKVFYFPRQQGFSCVPTAGGCTLGMGARHVGFKTMTLAEHAAELRRAHRSQNQE----- 362
            :::|..|.|:||.|:|||:.||:.||.||||.:||...:..||.|.|.|..|.||...:|     
  Rat   114 NVHFSCVTVYYFTRRQGFTSVPSQGGSTLGMSSRHNSVRQYTLGEFAREQERLHREMLREHLREE 178

  Fly   363 ------LQPRGSSSDDSEESEEDYLSEGSGSD-----AEDGSNGFLQPVTPKQRRALLKAAGVRK 416
                  |:...:.:.:|||:....:.:.|..|     .|.....||||:..|:|||||:|:||:|
  Rat   179 KLNSLKLKMTKNGTVESEEASTLTVDDISDDDIDLDNTEVDEYFFLQPLPTKKRRALLRASGVKK 243

  Fly   417 IDASEKSECRDIRNSREVCGCSCREFCDPETCACSQAGIKCQVDRAMFPCGCTREACGNTVGRVE 481
            ||..||.|.|.||.|||.|||.||.|||||||.||.|||||||||..||||||:|.|.||.||:|
  Rat   244 IDVEEKHELRAIRLSREDCGCDCRVFCDPETCTCSLAGIKCQVDRMSFPCGCTKEGCSNTAGRIE 308

  Fly   482 FNPTRVRTHYIHTVMRLDLEQ-RQGSVQGVQGGHLQPQQQQPSQQTIGYSPVGTAGSTSAYFLQT 545
            |||.|||||::||:|:|:||: |:.....:.|.|.:.....||        :|....:..|.:..
  Rat   309 FNPIRVRTHFLHTIMKLELEKNREQQTPTLNGCHGEISTHGPS--------MGPVAHSVEYSIAD 365

  Fly   546 QSNYSSGYASPAYTPESSVSYYQQQVQQPG-----------------VPTAGQLIP----QQQQA 589
            .....|       .|:::|.:.|:::...|                 ..:...|.|    ::::.
  Rat   366 NFEIES-------EPQAAVLHLQEELDCQGDEEEEEEDGSSFCSGATDSSTQSLAPSESDEEEEE 423

  Fly   590 QSQSYAGYAQLDSLDSG-LFASGSNATPSYGELYQSLSYGSTQITSYTAAYQQHSASPAVAVA-- 651
            :.:......:.|..|.| .|..|..|......|...|.|     :..||.::.|:.:.:...:  
  Rat   424 EEEEEEEEEEDDDDDKGDGFVEGLGAHTEVVPLPSVLCY-----SDGTAVHESHTKNASFYASSS 483

  Fly   652 ----------PGAPSSCAYSSCAVPSVPPYGNATTTASSNVPYQTTAVSMTAASTSASPSRLVGN 706
                      ||.||..:      .:.|........|.|.|||..|            |.|.|..
  Rat   484 TLYYQIDSHIPGTPSQLS------DNYPERDTVKNGALSLVPYAMT------------PERFVDY 530

  Fly   707 PVGSATASPATVSSSPATASGNEFISLSTPIASSSRLSQINDLLQHNRNTTAALVAVSEGLSGGR 771
            ...:..|..|  |..||   .|..:.:..|.:.:......|.|...:|:.... |.....|.|..
  Rat   531 ARQAEEAYGA--SHYPA---ANPSVIVCCPTSENDSGVPCNPLYPEHRSNLPQ-VEFHSYLKGPS 589

  Fly   772 TSSSASTIDS---IDTPPIVD--DGQQRGCMSFEALPPPLVNPAPI 812
            .....||::.   |...|..:  ...::..:..|.:..|:|...|:
  Rat   590 QEGFVSTLNGDSHISEHPAENPLSLAEKSRLHEECIQSPVVETVPV 635

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Axud1NP_001259928.1 CSRNP_N 301..500 CDD:292638 110/218 (50%)
PHA03255 643..>786 CDD:165513 30/157 (19%)
Csrnp3XP_038960765.1 CSRNP_N 111..328 CDD:406427 108/216 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166354294
Domainoid 1 1.000 217 1.000 Domainoid score I2595
eggNOG 1 0.900 - - E1_KOG3813
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001585
OrthoInspector 1 1.000 - - otm44756
orthoMCL 1 0.900 - - OOG6_108991
Panther 1 1.100 - - O PTHR13580
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1316
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1110.700

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