DRSC/TRiP Functional Genomics Resources

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Protein Alignment Axud1 and csrnp2

DIOPT Version :9

Sequence 1:NP_001259928.1 Gene:Axud1 / 33419 FlyBaseID:FBgn0261647 Length:852 Species:Drosophila melanogaster
Sequence 2:NP_001120239.1 Gene:csrnp2 / 100145289 XenbaseID:XB-GENE-983697 Length:520 Species:Xenopus tropicalis


Alignment Length:579 Identity:182/579 - (31%)
Similarity:248/579 - (42%) Gaps:157/579 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly   270 NLKRRLED-----------------SESDAIDLVPDMSAP------PVAPQKRTK----RSINFD 307
            :||||.|:                 |.||:.:....::||      |.:..||.|    :::.||
 Frog     8 SLKRRFEEVDVGSPISTPKDSDDEISNSDSAESCDSINAPTTNELMPTSILKRQKQLRQKNVRFD 72

  Fly   308 EVKVFYFPRQQGFSCVPTAGGCTLGMGARHVGFKTMTLAEHAAELRRAHRS------QNQELQPR 366
            :|.|:||.|:|||:.||:.||.:|||...|...:..||.|.|.|...:||.      :.::|..|
 Frog    73 QVTVYYFSRRQGFTSVPSQGGSSLGMAQHHNSVRKYTLCEFAEEQEVSHREILREHLKEEKLHTR 137

  Fly   367 -----GSSSDDSEESE----EDYLSEGSGSDA-EDGSNGFLQPVTPKQRRALLKAAGVRKIDASE 421
                 .:.:.:|||:|    ||...|....|: |.....||||:..|:|||||:||||.:|||.|
 Frog   138 KMKLTKNGTVESEEAEGLTLEDVSDEDIDVDSVEVDDYFFLQPLPTKRRRALLRAAGVHRIDAEE 202

  Fly   422 KSECRDIRNSREVCGCSCREFCDPETCACSQAGIKCQVDRAMFPCGCTREACGNTVGRVEFNPTR 486
            |.|.|.||.|||.|||.||.:||||.|.||||||||||||..|||||:|:.|.|..||:||||.|
 Frog   203 KQELRAIRLSREECGCDCRLYCDPEACPCSQAGIKCQVDRMSFPCGCSRDGCSNIAGRIEFNPIR 267

  Fly   487 VRTHYIHTVMRLDLEQRQGSVQGVQGGHLQPQQQQPSQQTIGYSPVGTAGSTSAYFLQTQSNYSS 551
            |||||:||:|:|:||::               :|||..|.:                        
 Frog   268 VRTHYLHTIMKLELEKK---------------RQQPKTQPV------------------------ 293

  Fly   552 GYASPAYTPESSVSYYQQQVQQPGVPTAGQLIPQQQQAQ------SQSY-----AGYAQLDS--- 602
                                 :..||....::|..|:.|      :::|     |....|.|   
 Frog   294 ---------------------EEEVPRGSIVVPPHQETQDFQEFIAENYHLENEAAVRHLQSAEE 337

  Fly   603 ----LDSGLFASGSNATPSYGELYQSLSYGSTQ------ITSYTAAYQQHSASPAVAVAPGAPSS 657
                ||.|..||..:          |||..||.      :.....:....|...:|.::.|:...
 Frog   338 RQRLLDEGDEASSGS----------SLSLDSTVEGLEVCLLETPMSLSPSSCHDSVLLSAGSSVL 392

  Fly   658 C-AYSSCAVPSVPPY---GNATTTASSNVPYQTTAVSMTAA--STSASPSRLVGNPVGSATASPA 716
            | .......|:.||.   .|..:....|.|.......:|.:  |.:..|:.||     ...|...
 Frog   393 CFTDEDSGRPATPPEYTDDNVVSIYDHNHPGLEAEPKVTESVHSEATEPNSLV-----KVEAEDC 452

  Fly   717 TVSSSPATASGN-EFISLSTPIASSSRLSQINDLLQHNRNTTAALVAVSEGLSGGRTSS 774
            ||.|  ....|: |.:|.|..||.:|..|.     .|....|.|.|. .||...|:..|
 Frog   453 TVPS--CFEEGHTEALSTSPSIAENSSASD-----AHTDRVTKASVC-EEGELEGKPDS 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Axud1NP_001259928.1 CSRNP_N 301..500 CDD:292638 109/218 (50%)
PHA03255 643..>786 CDD:165513 35/139 (25%)
csrnp2NP_001120239.1 CSRNP_N 66..281 CDD:292638 108/214 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 215 1.000 Domainoid score I2660
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001585
OrthoInspector 1 1.000 - - otm47793
Panther 1 1.100 - - LDO PTHR13580
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3357
SonicParanoid 1 1.000 - - X1316
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
77.040

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