DRSC/TRiP Functional Genomics Resources

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Protein Alignment Axud1 and csrnp2

DIOPT Version :9

Sequence 1:NP_001259928.1 Gene:Axud1 / 33419 FlyBaseID:FBgn0261647 Length:852 Species:Drosophila melanogaster
Sequence 2:XP_001343412.1 Gene:csrnp2 / 100003989 ZFINID:ZDB-GENE-090312-137 Length:524 Species:Danio rerio


Alignment Length:529 Identity:165/529 - (31%)
Similarity:234/529 - (44%) Gaps:98/529 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   262 VETKPIRSNLKRRLED-----------------SESDAIDLVPDMSAP-----PVAPQKRTK--- 301
            :||...| .||||.|:                 |.||:.|....::||     |.:..:|.|   
Zfish     1 METVSSR-GLKRRFEEVDSGSPCSTPKDSDDDISSSDSADSCDSLNAPSSSLTPPSILRRHKVSL 64

  Fly   302 --RSINFDEVKVFYFPRQQGFSCVPTAGGCTLGMGARHVGFKTMTLAEHAAELRRAHRS------ 358
              :.:.||.|.|:||.|:|||:.||:.||.:|||...|...:..||.|.|.|...:|:.      
Zfish    65 GRKQVRFDAVTVYYFSRRQGFTSVPSQGGSSLGMARHHCAIRHYTLGEFAREQESSHKHVLRQHL 129

  Fly   359 QNQELQPR-----GSSSDDSEESEEDYLSEGSGSD-----AEDGSNGFLQPVTPKQRRALLKAAG 413
            :.::|..|     .:.:.|..|:|...|.:.|..|     .|.....||||:..|:|||||:|:|
Zfish   130 RQEKLNARKLKLTRNGTVDCPEAELLTLDDISDEDLDVESVEVDDCFFLQPLPTKRRRALLRASG 194

  Fly   414 VRKIDASEKSECRDIRNSREVCGCSCREFCDPETCACSQAGIKCQVDRAMFPCGCTREACGNTVG 478
            :.:|||.||:|.|.||.|||.|||.||.:|||..|.||||||||||||..|||||||:.|||:.|
Zfish   195 IARIDAREKAELRAIRLSREECGCDCRFYCDPRHCGCSQAGIKCQVDRMSFPCGCTRDGCGNSAG 259

  Fly   479 RVEFNPTRVRTHYIHTVMRLDLEQRQGSVQGVQGGH-LQPQQQQPSQQTIGYSPVGTAGSTSAYF 542
            |:||||.||||||:||:|:||||:|  ::.||:.|. ...:.:..|..::..||:.:.....:..
Zfish   260 RIEFNPLRVRTHYLHTIMKLDLEKR--TLLGVRSGEDCVEEAELVSSPSLSLSPLDSDVEVESQS 322

  Fly   543 LQ-----------TQSNYSSGYASPAYTPESSVSYYQQQVQ--QPGVPT----AGQLIPQQQQAQ 590
            :|           .::..:..:...|...|..:...:|||:  |...||    .|.|..|.:...
Zfish   323 IQELQEEQCDSLERENETAVLHLQSAEERERRLEQEEQQVEETQATDPTLCLLQGALTSQAEMEG 387

  Fly   591 SQSYAGYAQLDSLDSGLFASGSNATPSYGELYQSLSYGSTQITSYTAAYQQHSASPAVAVAPGAP 655
            .:...|.     |..|.|..|:                     :.....:.|:...........|
Zfish   388 MERVEGV-----LLEGPFPEGA---------------------TLLCITENHADEQTQQNLLKDP 426

  Fly   656 SSCAYSSCAVPSVPPYGNATTTASSNVPYQTTAVSMTAASTSASPSRLVGNPVGSATASPATVSS 720
            :|..|..        .|:..|.|...:|.|...|............|......|..:|...:|..
Zfish   427 ASVLYYQ--------VGHVETAAFETLPAQVEEVVSEGGDPEMESDRQKQETCGQDSAKSLSVEV 483

  Fly   721 SPATASGNE 729
            .|....|:|
Zfish   484 PPLLEDGSE 492

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Axud1NP_001259928.1 CSRNP_N 301..500 CDD:292638 105/219 (48%)
PHA03255 643..>786 CDD:165513 16/87 (18%)
csrnp2XP_001343412.1 CSRNP_N 66..281 CDD:292638 104/214 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170596568
Domainoid 1 1.000 217 1.000 Domainoid score I2611
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001585
OrthoInspector 1 1.000 - - otm25190
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR13580
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3357
SonicParanoid 1 1.000 - - X1316
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
98.970

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