Protein Alignment Rab5 and YPT53

DIOPT Version :9

• Sequence 1: NP_001259925.1
• Gene: Rab5 / 33418
• FlyBaseID: FBgn0014010
• Length: 219
• Species: Drosophila melanogaster
• Sequence 2: NP_014306.3
• Gene: YPT53 / 855631
• SGDID: S000005037
• Length: 220
• Species: Saccharomyces cerevisiae
• Alignment Length: 205
• Identity: 99/205 - (48%)
• Similarity: 128/205 - (62%)
• Gaps: 18/205 - (8%)

  Fly    31 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAGQERYHSLA 95
            |:||||||||||||:|||||...|.|.:|.||||||||:.|..:..|:||||||||||||:..||
Yeast    14 KVVLLGESAVGKSSIVLRFVSDDFKESKEPTIGAAFLTKRITRDGKVIKFEIWDTAGQERFAPLA 78

  Fly    96 PMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASPNIVIALAGNKADLSN------IRVVEF 154
            |||||.||||:||:|:.|:.||.:|:.||:|||::...:|||||.|||.||.|      .|.::.
Yeast    79 PMYYRNAQAALVVFDVTNEGSFYKAQNWVEELHEKVGHDIVIALVGNKMDLLNNDDENENRAMKA 143

  Fly   155 DEAKQYAEENGLLFMETSAKTGMNVNDIFLAIAKKLPKNDG------------ANNQGTSIRPTG 207
            ...:...|...||:.|.|||||.|:..||..:.:|:|..:.            .:||...:..|.
Yeast   144 PAVQNLCERENLLYFEASAKTGENIYQIFQTLGEKVPCPEQNTRQSSTHDRTITDNQRIDLESTT 208

  Fly   208 TETNRPTNNC 217
            .|:.|.|..|
Yeast   209 VESTRETGGC 218

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab5	NP_001259925.1	Rab5_related	29..191	CDD:206653	91/165 (55%)
YPT53	NP_014306.3	Rab5_related	12..180	CDD:206653	91/165 (55%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	203	1.000	Domainoid score	I541
eggNOG	1	0.900	-	-		E1_KOG0092
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	206	1.000	Inparanoid score	I829
Isobase	1	0.950	-	0	Normalized mean entropy	S266
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	1	1.000	-	-		otm46865
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR24073
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X457
TreeFam	0	0.000	Not matched by this tool.
	8	7.910