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Protein Alignment Rab5 and RAB6C
DIOPT Version :9
Sequence 1: | NP_001259925.1 |
Gene: | Rab5 / 33418 |
FlyBaseID: | FBgn0014010 |
Length: | 219 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_115520.2 |
Gene: | RAB6C / 84084 |
HGNCID: | 16525 |
Length: | 254 |
Species: | Homo sapiens |
Alignment Length: | 188 |
Identity: | 73/188 - (38%) |
Similarity: | 110/188 - (58%) |
Gaps: | 4/188 - (2%) |
- Green bases have known domain annotations that are detailed below.
Fly 21 GTSQNKSCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDT 85
|...|...:||||.|||.:|.|:||:.||....|....::.||..||::|:.:||..:...:|||
Human 5 GDFGNPLRKFKLVFLGEQSVAKTSLITRFRYDSFDNTYQAIIGIDFLSKTMYLEDGTIGLRLWDT 69
Fly 86 AGQERYHSLAPMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASPNIVIALAGNKADLSNIR 150
|||||..||.|.|.|.:.||:|||||.|.:|||:...|:.::..:...:::|.|.||:.||::.|
Human 70 AGQERLRSLIPRYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERGSDVIITLVGNRTDLADKR 134
Fly 151 VVEFDEAKQYAEENGLLFMETSAKTGMNVNDIFLAIAKKLP----KNDGANNQGTSIR 204
.|..:|.::.|:...:.|:||.||.|.||..:|..:|..|| ..||:....:.|:
Human 135 QVSVEEGERKAKGLNVTFIETRAKAGYNVKQLFRRVAAALPGMESTQDGSREDMSDIK 192
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
User_Submission |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.910 |
|
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