DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab5 and RHA1

DIOPT Version :9

Sequence 1:NP_001259925.1 Gene:Rab5 / 33418 FlyBaseID:FBgn0014010 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_001330210.1 Gene:RHA1 / 834549 AraportID:AT5G45130 Length:208 Species:Arabidopsis thaliana


Alignment Length:186 Identity:118/186 - (63%)
Similarity:140/186 - (75%) Gaps:0/186 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 VLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAGQERYHSLAPM 97
            ||||:...|||||||||||.||.|:|||||||||.:||:.:.|..||||||||||||||||||||
plant    22 VLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPM 86

  Fly    98 YYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASPNIVIALAGNKADLSNIRVVEFDEAKQYAE 162
            |||||.|||:|:||.||.||:|||.||:||..|.:||:|:|||||||||.:.|.|..:||:.||:
plant    87 YYRGAAAAIIVFDITNQASFERAKKWVQELQAQGNPNMVMALAGNKADLLDARKVSAEEAEIYAQ 151

  Fly   163 ENGLLFMETSAKTGMNVNDIFLAIAKKLPKNDGANNQGTSIRPTGTETNRPTNNCC 218
            ||.|.||||||||..||.|||..|||:||:...|.|....:.|.|......:::||
plant   152 ENSLFFMETSAKTATNVKDIFYEIAKRLPRVQPAENPTGMVLPNGPGATAVSSSCC 207

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab5NP_001259925.1 Rab5_related 29..191 CDD:206653 110/157 (70%)
RHA1NP_001330210.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 226 1.000 Domainoid score I675
eggNOG 1 0.900 - - E1_KOG0092
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 245 1.000 Inparanoid score I1056
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1340129at2759
OrthoFinder 1 1.000 - - FOG0000845
OrthoInspector 1 1.000 - - otm3301
orthoMCL 1 0.900 - - OOG6_100743
Panther 1 1.100 - - O PTHR24073
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X457
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.830

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