DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Rab5 and RABA4B

DIOPT Version :9

Sequence 1:	NP_001259925.1	Gene:	Rab5 / 33418	FlyBaseID:	FBgn0014010	Length:	219	Species:	Drosophila melanogaster
Sequence 2:	NP_195709.1	Gene:	RABA4B / 830160	AraportID:	AT4G39990	Length:	224	Species:	Arabidopsis thaliana

Alignment Length:	225	Identity:	90/225 - (40%)
Similarity:	127/225 - (56%)	Gaps:	21/225 - (9%)

- Green bases have known domain annotations that are detailed below.

  Fly     9 GASGTGTAQRPNGTSQNKSCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICI 73
            |..|.|      |.|......||:||:|:||||||.|:.||.:.:|....::|||..|.|:|:.|
plant     3 GGGGYG------GASGKVDYVFKVVLIGDSAVGKSQLLARFARDEFSMDSKATIGVEFQTRTLSI 61

  Fly    74 EDTVVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASPNIVIA 138
            |...:|.:||||||||||.::...|||||..|::|||:..:::|:....|::||...|..||||.
plant    62 EQKSIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRETFEHIPRWLEELRAHADKNIVII 126

  Fly   139 LAGNKADLSNIRVVEFDEAKQYAEENGLLFMETSAKTGMNVNDIFLAI---------AKKLPKND 194
            |.|||:||.:.|.|..::||::||:.||.|:||||....||.:.|..:         .|.|....
plant   127 LIGNKSDLEDQRAVPTEDAKEFAEKEGLFFLETSALNATNVENSFNTLMTQIYNTVNKKNLASEG 191

  Fly   195 GANNQGT------SIRPTGTETNRPTNNCC 218
            .:||.|:      .|..:|.|....|:.||
plant   192 DSNNPGSLAGKKILIPGSGQEIPAKTSTCC 221

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Rab5	NP_001259925.1	Rab5_related	29..191	CDD:206653	75/170 (44%)
RABA4B	NP_195709.1	PLN03110	15..223	CDD:178657	85/207 (41%)
RABA4B	NP_195709.1	Rab11_like	15..179	CDD:206660	74/163 (45%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910