Protein Alignment Rab5 and RABH1c

DIOPT Version :9

• Sequence 1: NP_001259925.1
• Gene: Rab5 / 33418
• FlyBaseID: FBgn0014010
• Length: 219
• Species: Drosophila melanogaster
• Sequence 2: NP_195699.1
• Gene: RABH1c / 830148
• AraportID: AT4G39890
• Length: 214
• Species: Arabidopsis thaliana
• Alignment Length: 167
• Identity: 71/167 - (42%)
• Similarity: 107/167 - (64%)
• Gaps: 1/167 - (0%)

  Fly    29 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAGQERYHS 93
            :||||.||:.:|||:|::.||:..:|....:.|||..||::|:.:||..|:.::||||||||:.|
plant     9 KFKLVFLGDQSVGKTSIITRFMYDKFDTTYQPTIGIDFLSKTMYLEDRTVRLQLWDTAGQERFRS 73

  Fly    94 LAPMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQ-ASPNIVIALAGNKADLSNIRVVEFDEA 157
            |.|.|.|.:..||||||:.|:.:|.....|::::|:: ...|::|.|.|||.||...|.|...|.
plant    74 LIPSYIRDSSVAIVVYDVSNRQTFLNTSKWIEDVHRERGQSNVIIVLVGNKTDLVEKRQVSISEG 138

  Fly   158 KQYAEENGLLFMETSAKTGMNVNDIFLAIAKKLPKND 194
            :...:|.|::|:|||||...|:..:|..||..||..|
plant   139 EDKGKEYGVMFIETSAKENFNIKALFRKIAAALPGVD 175

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab5	NP_001259925.1	Rab5_related	29..191	CDD:206653	68/162 (42%)
RABH1c	NP_195699.1	Rab6	10..171	CDD:206654	68/160 (43%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910