Protein Alignment Rab5 and Rab3b

DIOPT Version :9

• Sequence 1: NP_001259925.1
• Gene: Rab5 / 33418
• FlyBaseID: FBgn0014010
• Length: 219
• Species: Drosophila melanogaster
• Sequence 2: NP_076026.1
• Gene: Rab3b / 69908
• MGIID: 1917158
• Length: 219
• Species: Mus musculus
• Alignment Length: 164
• Identity: 62/164 - (37%)
• Similarity: 94/164 - (57%)
• Gaps: 0/164 - (0%)

  Fly    20 NGTSQNKSCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWD 84
            :.:.||....|||:::|.|:|||:|.:.|:....|.....||:|..|..:|:...:..||.:|||
Mouse    13 DASDQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIWD 77

  Fly    85 TAGQERYHSLAPMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASPNIVIALAGNKADLSNI 149
            |||||||.::...|||||...|::|||.|::||...:.|..::...:..|..:.|.|||.|:...
Mouse    78 TAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNKCDMEEE 142

  Fly   150 RVVEFDEAKQYAEENGLLFMETSAKTGMNVNDIF 183
            |||..::.:..||:.|..|.|.|||..::|...|
Mouse   143 RVVPTEKGRLLAEQLGFDFFEASAKENISVRQAF 176

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab5	NP_001259925.1	Rab5_related	29..191	CDD:206653	60/155 (39%)
Rab3b	NP_076026.1	Rab3	22..186	CDD:206657	60/155 (39%)
		Effector region. /evidence=ECO:0000250	51..59		3/7 (43%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910