Protein Alignment Rab5 and Rab20

DIOPT Version :9

• Sequence 1: NP_001259925.1
• Gene: Rab5 / 33418
• FlyBaseID: FBgn0014010
• Length: 219
• Species: Drosophila melanogaster
• Sequence 2: NP_001103005.1
• Gene: Rab20 / 689377
• RGDID: 1593487
• Length: 232
• Species: Rattus norvegicus
• Alignment Length: 205
• Identity: 62/205 - (30%)
• Similarity: 94/205 - (45%)
• Gaps: 52/205 - (25%)

  Fly    17 QRPNGTSQNKSCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFE 81
            ::|:|         |:||||:..|||:||:.|:::.:|.: ..||:|.||..:    :.......
  Rat     2 RKPDG---------KIVLLGDMNVGKTSLLQRYMERRFPD-TVSTVGGAFYLK----QWRSFNIS 52

  Fly    82 IWDTAGQERYHSLAPMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASPNIVIALAGNKADL 146
            ||||||:|::|.|..||.|||.|.|:.||:.|..|....:.....|.:.|:.:.:.|:.|||.||
  Rat    53 IWDTAGREQFHGLGSMYCRGAAAIILTYDVNNPQSLFELEDRFLGLTETANNDCLFAIVGNKVDL 117

  Fly   147 SNIRVVEFDEAKQYAEENG--------------------------------------LLFMETSA 173
            :..|..|..|..|.:.:.|                                      .:..||||
  Rat   118 TTERGPEGGEKDQASGKTGSCVSSKVPKQVHPEDAMALYKKILKYKMLDEREMPGAEQMCFETSA 182

  Fly   174 KTGMNVNDIF 183
            |||.||:.:|
  Rat   183 KTGHNVDLLF 192

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab5	NP_001259925.1	Rab5_related	29..191	CDD:206653	60/193 (31%)
Rab20	NP_001103005.1	Rab20	7..231	CDD:133326	60/191 (31%)
		Ras	7..195	CDD:278499	60/191 (31%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_KOG0092
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1340129at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.820