DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab5 and RAB17

DIOPT Version :10

Sequence 1:NP_523457.1 Gene:Rab5 / 33418 FlyBaseID:FBgn0014010 Length:219 Species:Drosophila melanogaster
Sequence 2:XP_016860182.1 Gene:RAB17 / 64284 HGNCID:16523 Length:338 Species:Homo sapiens


Alignment Length:126 Identity:65/126 - (51%)
Similarity:88/126 - (69%) Gaps:2/126 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAGQERYHSL 94
            |||||||..:||||||.||:||..|.... .|:|.||.|:.:.:..|.:|.|||||||||:|||:
Human    20 FKLVLLGSGSVGKSSLALRYVKNDFKSIL-PTVGCAFFTKVVDVGATSLKLEIWDTAGQEKYHSV 83

  Fly    95 APMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASP-NIVIALAGNKADLSNIRVVEF 154
            ..:|:|||.||::||||..:|||.:|:.|:|:|.::..| .:::.|.|||.|||..|.|.|
Human    84 CHLYFRGANAALLVYDITRKDSFLKAQQWLKDLEEELHPGEVLVMLVGNKTDLSQEREVTF 144

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab5NP_523457.1 Rab5_related 29..191 CDD:206653 65/126 (52%)
RAB17XP_016860182.1 P-loop containing Nucleoside Triphosphate Hydrolases 20..>146 CDD:476819 65/126 (52%)

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