Protein Alignment Rab5 and rab5d

DIOPT Version :9

• Sequence 1: NP_001259925.1
• Gene: Rab5 / 33418
• FlyBaseID: FBgn0014010
• Length: 219
• Species: Drosophila melanogaster
• Sequence 2: NP_001025576.1
• Gene: rab5d / 594964
• XenbaseID: XB-GENE-489496
• Length: 213
• Species: Xenopus tropicalis
• Alignment Length: 207
• Identity: 143/207 - (69%)
• Similarity: 172/207 - (83%)
• Gaps: 9/207 - (4%)

  Fly    18 RPNGTSQNKSCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEI 82
            |.||..|.|.|||||||||:.||||||||||||||||.|:||:|||||||.|::|::||.|||||
 Frog     8 RANGVGQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQSVCLDDTTVKFEI 72

  Fly    83 WDTAGQERYHSLAPMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASPNIVIALAGNKADLS 147
            ||||||||||||||||||||||||||:||...::|.|||.|||||.:||||||||||||||:||:
 Frog    73 WDTAGQERYHSLAPMYYRGAQAAIVVFDITKPETFDRAKAWVKELQRQASPNIVIALAGNKSDLA 137

  Fly   148 NIRVVEFDEAKQYAEENGLLFMETSAKTGMNVNDIFLAIAKKLPKNDGAN------NQGTSIRPT 206
            ..|:||::||:.|||:.|||||||||||.||||::|||||||:||:|..|      |:|.:::
 Frog   138 EKRMVEYEEAQAYAEDTGLLFMETSAKTAMNVNELFLAIAKKMPKSDAQNPTHAARNRGVNVQ-- 200

  Fly   207 GTETNRPTNNCC 218
            |:| .:|.:.||
 Frog   201 GSE-QQPRSGCC 211

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab5	NP_001259925.1	Rab5_related	29..191	CDD:206653	126/161 (78%)
rab5d	NP_001025576.1	Rab5_related	19..181	CDD:206653	126/161 (78%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	275	1.000	Domainoid score	I1722
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1340129at2759
OrthoFinder	1	1.000	-	-		FOG0000845
OrthoInspector	1	1.000	-	-		otm48913
Panther	1	1.100	-	-	O	PTHR24073
Phylome	1	0.910	-	-
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R2000
SonicParanoid	1	1.000	-	-		X457
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	8	8.050