Protein Alignment Rab5 and rab20

DIOPT Version :9

• Sequence 1: NP_001259925.1
• Gene: Rab5 / 33418
• FlyBaseID: FBgn0014010
• Length: 219
• Species: Drosophila melanogaster
• Sequence 2: XP_012812505.1
• Gene: rab20 / 550049
• XenbaseID: XB-GENE-494912
• Length: 272
• Species: Xenopus tropicalis
• Alignment Length: 258
• Identity: 79/258 - (30%)
• Similarity: 114/258 - (44%)
• Gaps: 54/258 - (20%)

  Fly     4 TPRSGGASGTGTAQRP-NGTSQNKSCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFL 67
            |....|..|:...||. ..||..|....||||||:..|||:||:.|:::.:|.: ..||:|.||.
 Frog    26 TGSKDGRPGSDVMQRLWFQTSSMKKPDLKLVLLGDMNVGKTSLLHRYMERRFQD-TVSTVGGAFY 89

  Fly    68 TQTICIEDTVVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQAS 132
            .:    :.......||||||:|::|.|..||.|.|.|.|:.||:.|..|....:.....|...|:
 Frog    90 LK----QWGPYNISIWDTAGREQFHGLGSMYCRAASAVILTYDVSNMQSLLELEDRFLGLTDTAN 150

  Fly   133 PNIVIALAGNKADL------------------SNIR-VVEFDEA---------KQYAEENGL--- 166
            .:.:.|:.|||.||                  |.|| .|:.::|         .:..:||.:
 Frog   151 DDCIFAVVGNKIDLTDDYDSESDMEGERPRTSSKIRKQVDLEDAIALYKRIMKYKMLDENVVPAA 215

  Fly   167 --LFMETSAKTGMNVNDIF---------LAIAKKLPKNDGANNQGTSIRPTGTETNRPTNNCC 218
              :..|||||||.||:.:|         |.:.||...:|...|...|      :..:..|.||
 Frog   216 EKMCFETSAKTGYNVDGLFEGVFNMVVPLIVKKKASGHDETVNLAQS------KPEKSKNRCC 272

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab5	NP_001259925.1	Rab5_related	29..191	CDD:206653	65/203 (32%)
rab20	XP_012812505.1	Rab20	53..272	CDD:133326	69/229 (30%)
		Ras	54..235	CDD:278499	61/185 (33%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1340129at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.920