Protein Alignment Rab5 and Rab17

DIOPT Version :9

• Sequence 1: NP_001259925.1
• Gene: Rab5 / 33418
• FlyBaseID: FBgn0014010
• Length: 219
• Species: Drosophila melanogaster
• Sequence 2: NP_001102833.1
• Gene: Rab17 / 503269
• RGDID: 1562478
• Length: 213
• Species: Rattus norvegicus
• Alignment Length: 202
• Identity: 89/202 - (44%)
• Similarity: 125/202 - (61%)
• Gaps: 24/202 - (11%)

  Fly    31 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAGQERYHSLA 95
            ||||||.|:|||:||.||::|..|.... .|:|.||.|:.:.:..:.:|.|||||||||:|||:.
  Rat    21 KLVLLGSSSVGKTSLALRYMKQDFSNVL-PTVGCAFFTKVVDLGSSSLKLEIWDTAGQEKYHSVC 84

  Fly    96 PMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASP-NIVIALAGNKADLSNIRVVEFDEAKQ 159
            .:|:|||.||::||||..:|||.:|:.|:::|.|:..| .:|:.|.|||.||...|.|.|.|.|:
  Rat    85 HLYFRGANAALLVYDITRKDSFHKAQQWLEDLEKEFHPGEVVVMLVGNKTDLGEEREVTFQEGKE 149

  Fly   160 YAEENGLLFMETSAKTGMNVNDIFLAIAKKLPK--NDGAN-----------NQGTSIRPTGTETN 211
            :||...|||||:|||....|::||..||::|.:  .||.:           |||.::||
  Rat   150 FAESKSLLFMESSAKLNYQVSEIFNTIAQELLQRAGDGQSSSPQEGEAVVLNQGPTVRP------ 208

  Fly   212 RPTNNCC 218
               ..||
  Rat   209 ---RQCC 212

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab5	NP_001259925.1	Rab5_related	29..191	CDD:206653	79/160 (49%)
Rab17	NP_001102833.1	Rab5_related	21..181	CDD:206653	79/160 (49%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1340129at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR24073
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	4.020