Protein Alignment Rab5 and Rit1

DIOPT Version :9

• Sequence 1: NP_001259925.1
• Gene: Rab5 / 33418
• FlyBaseID: FBgn0014010
• Length: 219
• Species: Drosophila melanogaster
• Sequence 2: XP_038958818.1
• Gene: Rit1 / 499652
• RGDID: 1559874
• Length: 219
• Species: Rattus norvegicus
• Alignment Length: 182
• Identity: 56/182 - (30%)
• Similarity: 100/182 - (54%)
• Gaps: 6/182 - (3%)

  Fly    18 RPNGTSQNK----SCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVV 78
            ||.|:|.:.    |.::|||:||...||||::.::|:..:|.|..:.||..|:..: |.|:|...
  Rat     6 RPVGSSCSSPAALSREYKLVMLGAGGVGKSAMTMQFISHRFPEDHDPTIEDAYKIR-IRIDDEPA 69

  Fly    79 KFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHK-QASPNIVIALAGN 142
            ..:|.|||||..:.::...|.|..:..|:.|.|.::.||...:.:.:.::: :.:.:..:.|.||
  Rat    70 NLDILDTAGQAEFTAMRDQYMRAGEGFIICYSITDRRSFHEVREFKQLIYRVRRTDDTPVVLVGN 134

  Fly   143 KADLSNIRVVEFDEAKQYAEENGLLFMETSAKTGMNVNDIFLAIAKKLPKND 194
            |:||..:|.|..:|....|.|....|.||||.....::|:|.|:.:::.|.:
  Rat   135 KSDLKQLRQVSKEEGLSLAREFNCPFFETSAAYRYYIDDVFHALVREIRKKE 186

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab5	NP_001259925.1	Rab5_related	29..191	CDD:206653	50/162 (31%)
Rit1	XP_038958818.1	Rit_Rin_Ric	20..191	CDD:206712	51/168 (30%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910