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Protein Alignment Rab5 and Rab1
DIOPT Version :9
Sequence 1: | NP_001259925.1 |
Gene: | Rab5 / 33418 |
FlyBaseID: | FBgn0014010 |
Length: | 219 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_732610.1 |
Gene: | Rab1 / 42524 |
FlyBaseID: | FBgn0285937 |
Length: | 205 |
Species: | Drosophila melanogaster |
Alignment Length: | 194 |
Identity: | 79/194 - (40%) |
Similarity: | 115/194 - (59%) |
Gaps: | 5/194 - (2%) |
- Green bases have known domain annotations that are detailed below.
Fly 30 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAGQERYHSL 94
|||:|:|:|.||||.|:|||....:.|...||||..|..:||.::...:|.:|||||||||:.::
Fly 12 FKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTI 76
Fly 95 APMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASPNIVIALAGNKADLSNIRVVEFDEAKQ 159
...|||||...|||||..:|:||...|.|::|:.:.|..|:...|.|||:||:..:||:...|.:
Fly 77 TSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNKLLVGNKSDLTTKKVVDHTTAAE 141
Fly 160 YAEENGLLFMETSAKTGMNVNDIFLAIAKKLPKNDGANNQGT-SIRPTGTETNRPTNN----CC 218
||.:.|:.|:|||||:..||...|:.:|.::....|..:..| :......:..||..| ||
Fly 142 YAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPPSSATDNASKVKIDQGRPVENTKSGCC 205
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C45454234 |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
P |
PTHR24073 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.940 |
|
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