Protein Alignment Rab5 and rab1bb

DIOPT Version :9

• Sequence 1: NP_001259925.1
• Gene: Rab5 / 33418
• FlyBaseID: FBgn0014010
• Length: 219
• Species: Drosophila melanogaster
• Sequence 2: NP_001002129.2
• Gene: rab1bb / 415219
• ZFINID: ZDB-GENE-040625-133
• Length: 201
• Species: Danio rerio
• Alignment Length: 193
• Identity: 79/193 - (40%)
• Similarity: 117/193 - (60%)
• Gaps: 4/193 - (2%)

  Fly    30 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAGQERYHSL 94
            |||:|:|:|.||||.::|||....:.|...||||..|..:||.::...:|.:|||||||||:.::
Zfish     9 FKLLLIGDSGVGKSCILLRFADDTYTESFISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTI 73

  Fly    95 APMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASPNIVIALAGNKADLSNIRVVEFDEAKQ 159
            ...|||||...|||||:.:|:|:...|.|:||:.:.||.|:...|.|||.||:..:||::..||:
Zfish    74 TSSYYRGAHGIIVVYDVTDQESYNNVKQWLKEIDRYASENVNKLLVGNKCDLTTKKVVDYTTAKE 138

  Fly   160 YAEENGLLFMETSAKTGMNVNDIFLAIAKKLPKNDGANNQGTSIRP----TGTETNRPTNNCC 218
            :|:..|:.|:|||||...||...|:.:|:::.|.......|.|.:|    ..|...:....||
Zfish   139 FADSLGIPFLETSAKNATNVEQAFMTMAEEIKKRMRPGASGGSEKPDLKIESTPVQQSGGGCC 201

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab5	NP_001259925.1	Rab5_related	29..191	CDD:206653	72/160 (45%)
rab1bb	NP_001002129.2	Rab1_Ypt1	7..172	CDD:206661	72/162 (44%)
		RAB	9..172	CDD:197555	72/162 (44%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
ZFIN	0	0.000	Not matched by this tool.
	2	1.910