Protein Alignment Rab5 and RabX5

DIOPT Version :9

• Sequence 1: NP_001259925.1
• Gene: Rab5 / 33418
• FlyBaseID: FBgn0014010
• Length: 219
• Species: Drosophila melanogaster
• Sequence 2: NP_647644.2
• Gene: RabX5 / 38209
• FlyBaseID: FBgn0035255
• Length: 277
• Species: Drosophila melanogaster
• Alignment Length: 165
• Identity: 57/165 - (34%)
• Similarity: 88/165 - (53%)
• Gaps: 13/165 - (7%)

  Fly    31 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAGQERYHSLA 95
            |::.:|:.:|||:::|.||...:|....::|||..|..:...|.......|:||||||||:..:|
  Fly    66 KVIFVGDCSVGKTAIVNRFCYDKFQSNYKATIGVDFELENFSILGHNYSLEMWDTAGQERFRCIA 130

  Fly    96 PMYYRGAQAAIVVYDIQNQDSFQRAKTWVKE-LHKQASPNIVIALAGNKADLSNIRVVEFDEAKQ 159
            ..|||.|...:|.||:..:||.:.||.|:.. |:..||...::.|.|.||||  :...||...::
  Fly   131 GAYYRNASVIVVTYDMSKKDSLESAKKWLNSALNYNASKRPLVFLVGTKADL--LSKEEFVRMER 193

  Fly   160 YAEENGLL-------FMETSAKTGMNVNDIFLAIA 187
            .|   ||.       :...||::|..|.::|..||
  Fly   194 LA---GLAAAELQAEYWSVSARSGFKVTELFQRIA 225

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab5	NP_001259925.1	Rab5_related	29..191	CDD:206653	57/165 (35%)
RabX5	NP_647644.2	P-loop_NTPase	66..230	CDD:304359	57/165 (35%)
		RAB	66..225	CDD:197555	55/163 (34%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C45454248
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.930