Protein Alignment Rab5 and Rabl2

DIOPT Version :9

• Sequence 1: NP_001259925.1
• Gene: Rab5 / 33418
• FlyBaseID: FBgn0014010
• Length: 219
• Species: Drosophila melanogaster
• Sequence 2: XP_006242287.1
• Gene: Rabl2 / 362987
• RGDID: 1306749
• Length: 250
• Species: Rattus norvegicus
• Alignment Length: 171
• Identity: 60/171 - (35%)
• Similarity: 90/171 - (52%)
• Gaps: 13/171 - (7%)

  Fly    31 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAGQERYHSLA 95
            |::.||:||||||.|:.||:...|...|.||........|..::...:..:.||||||||:.|:.
  Rat    50 KIICLGDSAVGKSKLMERFLMDGFQPQQLSTYALTLYKHTATVDGKTILVDFWDTAGQERFQSMH 114

  Fly    96 PMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASPNIVIALAGNKADLSNIRVVE--FDEAK 158
            ..||..|.|.|:|:|:|.:.:::...||..|| ::..|.|...|..||.| ::|::.:  |..||
  Rat   115 ASYYHKAHACIMVFDVQRKITYKNLGTWYAEL-REFRPEIPCILVANKID-ADIQMTQKNFSFAK 177

  Fly   159 QYAEENGLLFMETSAKTGMNVNDIF-----LAIAKKLPKND 194
            :::    |.....||..|.||..:|     ||:|.|....|
  Rat   178 KFS----LPLYFVSAADGTNVVKLFNDAIRLAVAYKKSSQD 214

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab5	NP_001259925.1	Rab5_related	29..191	CDD:206653	59/166 (36%)
Rabl2	XP_006242287.1	RabL2	49..209	CDD:133324	58/164 (35%)
		RAB	49..198	CDD:197555	54/153 (35%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1340129at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010