Protein Alignment Rab5 and Rab18

DIOPT Version :9

• Sequence 1: NP_001259925.1
• Gene: Rab5 / 33418
• FlyBaseID: FBgn0014010
• Length: 219
• Species: Drosophila melanogaster
• Sequence 2: NP_001012486.1
• Gene: Rab18 / 307039
• RGDID: 1308905
• Length: 206
• Species: Rattus norvegicus
• Alignment Length: 181
• Identity: 74/181 - (40%)
• Similarity: 106/181 - (58%)
• Gaps: 7/181 - (3%)

  Fly    31 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAGQERYHSLA 95
            |::::|||.||||||:|||....|.....:|||..|..:||.::....|..|||||||||:.:|.
  Rat    10 KILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLT 74

  Fly    96 PMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASPN-IVIALAGNKADLSNIRVVEFDEAKQ 159
            |.||||||..|:|||:..:|:|.:...|:.||....:.| ||..|.|||.|..| |.|:.:|..:
  Rat    75 PSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVNMLVGNKIDKEN-REVDRNEGLK 138

  Fly   160 YAEENGLLFMETSAKTGMNVNDIFLAIAKKLPKNDGA-----NNQGTSIRP 205
            :|.::.:||:|.||||...|...|..:.:|:.:..|.     .|:|..:.|
  Rat   139 FARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESENQNKGVKLSP 189

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab5	NP_001259925.1	Rab5_related	29..191	CDD:206653	70/160 (44%)
Rab18	NP_001012486.1	RAB	9..172	CDD:197555	70/162 (43%)
		Rab18	9..169	CDD:206656	69/159 (43%)
		Effector region. /evidence=ECO:0000250	37..45		3/7 (43%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.910