Protein Alignment Rab5 and ypt3

DIOPT Version :9

• Sequence 1: NP_001259925.1
• Gene: Rab5 / 33418
• FlyBaseID: FBgn0014010
• Length: 219
• Species: Drosophila melanogaster
• Sequence 2: NP_001342809.1
• Gene: ypt3 / 2542219
• PomBaseID: SPAC18G6.03
• Length: 214
• Species: Schizosaccharomyces pombe
• Alignment Length: 213
• Identity: 87/213 - (40%)
• Similarity: 126/213 - (59%)
• Gaps: 22/213 - (10%)

  Fly    28 CQ-------FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDT 85
            ||       ||.||:|:|.||||:|::||.:.:|:...:||||..|.|:.|.:::..:|.:||||
pombe     2 CQEDEYDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDT 66

  Fly    86 AGQERYHSLAPMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASPNIVIALAGNKADLSNIR 150
            ||||||.::...|||||..|::||||..|.||.....|:|||.:.|..||||.|.|||.||.::|
pombe    67 AGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTDLLHLR 131

  Fly   151 VVEFDEAKQYAEENGLLFMETSAKTGMNVNDIFLAIAKKLPK----------NDGAN---NQGTS 202
            .|..:||:.:|.||.|.|:||||....||.:.|..:..::.:          :||.:   .|..:
pombe   132 AVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNRSLEAGDDGVHPTAGQTLN 196

  Fly   203 IRPTGTETN--RPTNNCC 218
            |.||..:.|  :.::.||
pombe   197 IAPTMNDLNKKKSSSQCC 214

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab5	NP_001259925.1	Rab5_related	29..191	CDD:206653	77/168 (46%)
ypt3	NP_001342809.1	Rab11_like	8..172	CDD:206660	76/163 (47%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910