DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab5 and Rheb

DIOPT Version :9

Sequence 1:NP_001259925.1 Gene:Rab5 / 33418 FlyBaseID:FBgn0014010 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_730950.2 Gene:Rheb / 117332 FlyBaseID:FBgn0041191 Length:182 Species:Drosophila melanogaster


Alignment Length:175 Identity:63/175 - (36%)
Similarity:91/175 - (52%) Gaps:9/175 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    32 LVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFL-TQTICIEDTVVKFEIWDTAGQERYHSLA 95
            :.::|..:||||||.::||:|||.:..:.||...|. .:.:..:|.:||  :.|||||:.|....
  Fly     8 IAMMGYRSVGKSSLCIQFVEGQFVDSYDPTIENTFTKIERVKSQDYIVK--LIDTAGQDEYSIFP 70

  Fly    96 PMYYRGAQAAIVVYDIQNQDSFQRAK-TWVKELHKQASPNIVIALAGNKADLSNIRVVEFDEAKQ 159
            ..|.......::||.|.:|.||:..| .:.|.|.......:.:.|.|||.||...|.|..:|.|:
  Fly    71 VQYSMDYHGYVLVYSITSQKSFEVVKIIYEKLLDVMGKKYVPVVLVGNKIDLHQERTVSTEEGKK 135

  Fly   160 YAEENGLLFMETSAKTGMNVNDIF--LAIAKKLPKNDGANNQGTS 202
            .||.....|:|||||...:|.|||  |.|   |.:|:..|.|..|
  Fly   136 LAESWRAAFLETSAKQNESVGDIFHQLLI---LIENENGNPQEKS 177

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab5NP_001259925.1 Rab5_related 29..191 CDD:206653 58/162 (36%)
RhebNP_730950.2 RheB 5..182 CDD:206709 63/175 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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