DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab5 and Rab31

DIOPT Version :9

Sequence 1:NP_001259925.1 Gene:Rab5 / 33418 FlyBaseID:FBgn0014010 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_598446.2 Gene:Rab31 / 106572 MGIID:1914603 Length:195 Species:Mus musculus


Alignment Length:193 Identity:92/193 - (47%)
Similarity:131/193 - (67%) Gaps:6/193 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAGQERYHS 93
            :.|:.|||::.|||||:|.|||:..|......||||:|:|:|:...:.:.||.|||||||||:||
Mouse     6 ELKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQERFHS 70

  Fly    94 LAPMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASPNIVIALAGNKADLSNIRVVEFDEAK 158
            ||||||||:.||::||||..||||...|.|||||.:....|||:|:||||.|||:||.|...:||
Mouse    71 LAPMYYRGSAAAVIVYDITKQDSFHTLKKWVKELKEHGPENIVMAIAGNKCDLSDIREVPLKDAK 135

  Fly   159 QYAEENGLLFMETSAKTGMNVNDIFLAIAKKLP---KNDGANNQGTSIRPTGTETNRPTNNCC 218
            :|||..|.:.:|||||..:|:.::|..|::::|   ..:..|:.|..:   |.::.:.:..||
Mouse   136 EYAESIGAIVVETSAKNAINIEELFQGISRQIPPLGPQENGNSGGIKL---GNQSLQASRRCC 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab5NP_001259925.1 Rab5_related 29..191 CDD:206653 86/161 (53%)
Rab31NP_598446.2 Rab5_related 6..168 CDD:206653 86/161 (53%)
Ras 8..168 CDD:278499 86/159 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG0092
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1340129at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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