Protein Alignment Rab5 and rab39a

DIOPT Version :9

• Sequence 1: NP_001259925.1
• Gene: Rab5 / 33418
• FlyBaseID: FBgn0014010
• Length: 219
• Species: Drosophila melanogaster
• Sequence 2: XP_002934692.1
• Gene: rab39a / 100494491
• XenbaseID: XB-GENE-1011717
• Length: 206
• Species: Xenopus tropicalis
• Alignment Length: 169
• Identity: 63/169 - (37%)
• Similarity: 96/169 - (56%)
• Gaps: 12/169 - (7%)

  Fly    29 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIED-----TVVKFEIWDTAGQ 88
            ||:::|||:|.|||:||:.|:..|||.:....|:|..|    .|.|:     ..|:.:.||||||
 Frog     8 QFRVLLLGDSGVGKTSLLHRYTDGQFTDTTTETVGVDF----CCREEEPEPGVKVRLQFWDTAGQ 68

  Fly    89 ERYHSLAPMYYRGAQAAIVVYDIQNQDSFQRAKTWVKEL--HKQASPNIVIALAGNKADLSNIRV 151
            |||.::...|||.|...::::|:..:.||.....|..|:  ..||.| :|..|.|.|.||...|:
 Frog    69 ERYRAVTRSYYRNAAGVLLLFDLTTRQSFDNVTEWHMEVTERTQAKP-MVFMLLGAKNDLKEKRM 132

  Fly   152 VEFDEAKQYAEENGLLFMETSAKTGMNVNDIFLAIAKKL 190
            |..:||::.||.....::||||:||.||:.....:.::|
 Frog   133 VTREEAQRLAENLSAPYLETSARTGSNVSAALSLLCREL 171

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab5	NP_001259925.1	Rab5_related	29..191	CDD:206653	63/169 (37%)
rab39a	XP_002934692.1	P-loop_NTPase	7..>171	CDD:393306	62/167 (37%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1340129at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010