Protein Alignment Rab5 and Rab37

DIOPT Version :9

• Sequence 1: NP_001259925.1
• Gene: Rab5 / 33418
• FlyBaseID: FBgn0014010
• Length: 219
• Species: Drosophila melanogaster
• Sequence 2: XP_008766630.1
• Gene: Rab37 / 100364984
• RGDID: 2319982
• Length: 223
• Species: Rattus norvegicus
• Alignment Length: 223
• Identity: 90/223 - (40%)
• Similarity: 131/223 - (58%)
• Gaps: 8/223 - (3%)

  Fly     1 MATTPRSGGASGTGTAQRPNGT---SQNKSCQFKLVLLGESAVGKSSLVLRFVKGQFHEYQ-EST 61
            |..||   ||:..|..:.|..:   |.|.....|::|||:|.|||:..:::|..|.|.... .:|
  Rat     1 MTGTP---GAATAGDGEAPERSPPFSPNYDLTGKVMLLGDSGVGKTCFLIQFKDGAFLSGTFIAT 62

  Fly    62 IGAAFLTQTICIEDTVVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDIQNQDSFQRAKTWVKE 126
            :|..|..:.:.::...||.:|||||||||:.|:...|||.|||.:::|||.||.||...:.|:.|
  Rat    63 VGIDFRNKVVTVDGARVKLQIWDTAGQERFRSVTHAYYRDAQALLLLYDITNQSSFDNIRAWLTE 127

  Fly   127 LHKQASPNIVIALAGNKADLSNIRVVEFDEAKQYAEENGLLFMETSAKTGMNVNDIFLAIAKKLP 191
            :|:.|..::||.|.|||||:|:.||:..::.:..|.|.|:.||||||||||||...||||||:|.
  Rat   128 IHEYAQRDVVIMLLGNKADVSSERVIRSEDGETLAREYGVPFMETSAKTGMNVELAFLAIAKELK 192

  Fly   192 KNDGANNQGTSIRPTG-TETNRPTNNCC 218
            ...|......|.:... .|:.:..::||
  Rat   193 YRAGKQPDEPSFQIRDYVESQKKRSSCC 220

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rab5	NP_001259925.1	Rab5_related	29..191	CDD:206653	75/162 (46%)
Rab37	XP_008766630.1	Rab26	31..220	CDD:206695	79/188 (42%)
		RAB	31..192	CDD:197555	75/160 (47%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.910