DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rab5 and rab22a

DIOPT Version :10

Sequence 1:NP_523457.1 Gene:Rab5 / 33418 FlyBaseID:FBgn0014010 Length:219 Species:Drosophila melanogaster
Sequence 2:NP_991282.2 Gene:rab22a / 100001531 ZFINID:ZDB-GENE-041114-161 Length:196 Species:Danio rerio


Alignment Length:193 Identity:92/193 - (47%)
Similarity:132/193 - (68%) Gaps:4/193 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly    29 QFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTICIEDTVVKFEIWDTAGQERYHS 93
            :.|:.|||::.|||||:|.|||:..|......||||:|:|:|:..::.:.||.|||||||||:.:
Zfish     5 ELKVCLLGDTGVGKSSIVCRFVEDSFDPNINPTIGASFMTKTVQYQNELHKFLIWDTAGQERFRA 69

  Fly    94 LAPMYYRGAQAAIVVYDIQNQDSFQRAKTWVKELHKQASPNIVIALAGNKADLSNIRVVEFDEAK 158
            ||||||||:.|||:||||..::|||..|.|||||.:...||||:|:||||.|||:.|.|...:||
Zfish    70 LAPMYYRGSAAAIIVYDITKEESFQTLKNWVKELRQHGPPNIVVAIAGNKCDLSDAREVSEKDAK 134

  Fly   159 QYAEENGLLFMETSAKTGMNVNDIFLAIAKKLPKND---GANNQGTSIRPTGTETNRPTNNCC 218
            .||:....:|:|||||..:|:|::|..|::::|..|   |:..:|..:|...:.:.| ...||
Zfish   135 DYADSIHAIFIETSAKNAININEVFTQISERIPVLDAEGGSAVKGFKLRRQPSVSTR-ERTCC 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rab5NP_523457.1 Rab5_related 29..191 CDD:206653 84/161 (52%)
rab22aNP_991282.2 Rab5_related 5..167 CDD:206653 84/161 (52%)

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