DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16995 and AT1G50050

DIOPT Version :9

Sequence 1:NP_608668.2 Gene:CG16995 / 33413 FlyBaseID:FBgn0031412 Length:146 Species:Drosophila melanogaster
Sequence 2:NP_175427.1 Gene:AT1G50050 / 841429 AraportID:AT1G50050 Length:226 Species:Arabidopsis thaliana


Alignment Length:133 Identity:41/133 - (30%)
Similarity:61/133 - (45%) Gaps:9/133 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SAQQFEQEVLQAHNLYRAKHGAQPLTLSPKLNRLATEWANYLLSRNRMEHRQNSGYGENIYMASG 66
            :||..:|:.|..||..||:.|...:.....:...||.:||.......:.......||||  :|:|
plant    22 NAQNAQQDYLNTHNTARAQVGVANVVWDTVVAAYATNYANARKVDCSLTPSTGGSYGEN--LANG 84

  Fly    67 GN--LKGADAVRSWYEEIRQYNWNSPSFQG--NTGHFTQVVWKSSTELGVG--FAKSGSTIYVVC 125
            .|  ..|..||..|..|...||:.:.:..|  ...|:|||||.:|.::|..  ...:|. .:|.|
plant    85 NNALFTGVAAVNLWVNEKPYYNYTANACIGAQQCKHYTQVVWSNSVKIGCARVLCNNGG-YFVGC 148

  Fly   126 NYN 128
            ||:
plant   149 NYD 151

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16995NP_608668.2 SCP_GAPR-1_like 5..125 CDD:240182 36/125 (29%)
AT1G50050NP_175427.1 SCP 27..151 CDD:294090 38/126 (30%)
Radical_SAM <155..185 CDD:302752
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 77 1.000 Domainoid score I3078
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 96 1.000 Inparanoid score I2214
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X35
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
76.830

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