DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG16995 and Crisp1

DIOPT Version :9

Sequence 1:	NP_608668.2	Gene:	CG16995 / 33413	FlyBaseID:	FBgn0031412	Length:	146	Species:	Drosophila melanogaster
Sequence 2:	NP_001034482.2	Gene:	Crisp1 / 654517	RGDID:	1590757	Length:	254	Species:	Rattus norvegicus

Alignment Length:	169	Identity:	46/169 - (27%)
Similarity:	73/169 - (43%)	Gaps:	42/169 - (24%)

- Green bases have known domain annotations that are detailed below.

  Fly     7 EQEVLQAHNLYRAKHGAQPLTLSPKLNRLATEWAN------YLLSR-------NRMEHR-QNSGY 57
            ::|::..||.:|  ....|    |..|.|...|::      .:|:|       :.:|.| .|:..
  Rat    46 QEEIVDTHNAFR--RNVSP----PARNMLKMSWSSAAAENARILARYCDKSDSDSLERRLPNTFC 104

  Fly    58 GENIYM----ASGGNLKGADAVRSWYEEIRQY---NWNSPSFQGNTGHFTQVVWKSSTELGVGFA 115
            |||::|    :|..|:     :..||.|.:.:   .|.|......|.|:||:||.||..:|...|
  Rat   105 GENMHMENYPSSWSNV-----IEIWYNESKYFKYGEWPSTDDDIETYHYTQMVWASSYLIGCDVA 164

  Fly   116 ----KSGSTIYVVCNYNPPGN----YNNLFRENVAPPMQ 146
                :..:|...||:|...||    .|..::|  .||.|
  Rat   165 SCRRQKAATYLYVCHYCHEGNSQDTLNMPYKE--GPPCQ 201

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG16995	NP_608668.2	SCP_GAPR-1_like	5..125	CDD:240182	36/142 (25%)
Crisp1	NP_001034482.2	SCP	46..182	CDD:294090	39/146 (27%)
Crisp1	NP_001034482.2	Crisp	200..254	CDD:285731	1/2 (50%)

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG2340
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1528782at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	1	1.100	-	-	O	PTHR10334
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X35
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	4	4.010