DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16995 and Clec18a

DIOPT Version :9

Sequence 1:NP_608668.2 Gene:CG16995 / 33413 FlyBaseID:FBgn0031412 Length:146 Species:Drosophila melanogaster
Sequence 2:XP_030099497.1 Gene:Clec18a / 353287 MGIID:2672935 Length:615 Species:Mus musculus


Alignment Length:157 Identity:43/157 - (27%)
Similarity:65/157 - (41%) Gaps:32/157 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 VLQAHNLYRAKHGAQPLTLSPKLNRLATEWANYL--LSRNRME---------------HRQNSGY 57
            :|.|||..|::  ..|    |..|....:|:..|  |:..|..               |  ||..
Mouse   130 ILTAHNRLRSR--VHP----PAANMQRMDWSESLAQLAEARAALCVTSVTPNLASTPGH--NSHV 186

  Fly    58 GENIYMASGGNLKGADAVRSWYEEIRQYNWNSPSFQGNT--GHFTQVVWKSSTELGVG----FAK 116
            |.|:.:...|:....:.|..|:.|..||.........|.  .|:||:||.:|::||.|    |..
Mouse   187 GWNVQLMPMGSASFVEVVNLWFAEGLQYRHGDAECAHNATCAHYTQLVWATSSQLGCGRQPCFVD 251

  Fly   117 SGSTIYVVCNYNPPGNYNNLFRENVAP 143
            ..:....||.|:|.||: ::..:.|||
Mouse   252 QEAMEAFVCAYSPGGNW-DINGKTVAP 277

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16995NP_608668.2 SCP_GAPR-1_like 5..125 CDD:240182 34/137 (25%)
Clec18aXP_030099497.1 CAP_euk 129..263 CDD:349399 36/140 (26%)
EGF_Lam 315..360 CDD:214543
CLECT 390..514 CDD:153057
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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