DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16995 and Crispld1

DIOPT Version :9

Sequence 1:NP_608668.2 Gene:CG16995 / 33413 FlyBaseID:FBgn0031412 Length:146 Species:Drosophila melanogaster
Sequence 2:NP_001128435.1 Gene:Crispld1 / 316482 RGDID:1564813 Length:500 Species:Rattus norvegicus


Alignment Length:158 Identity:41/158 - (25%)
Similarity:65/158 - (41%) Gaps:40/158 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 QEVLQAHN-----LYRAKHGAQPLTLSPKLNRLATEWANYLLSRNRMEHRQNS---GYGENIYMA 64
            |.:|..||     :|.|....:.:|...:|.|.|..||...|    .||...|   ..|:|:...
  Rat    63 QSILDLHNKLRSQVYPAASNMEYMTWDVELERSAESWAETCL----WEHGPTSLLPSIGQNLGAH 123

  Fly    65 SGGNLKGADAVRSWYEEIRQYNW--------------NSPSFQGNTGHFTQVVWKSSTELGVGFA 115
            .|........|::||:|:|.:::              :.|.    ..|:|||||.:|:.:|....
  Rat   124 WGRYRPPTFHVQAWYDEVRDFSYPYEHECDPYCPFRCSGPV----CTHYTQVVWATSSRIGCAIN 184

  Fly   116 KSGS----------TIYVVCNYNPPGNY 133
            ...:          .:|:||||:|.||:
  Rat   185 LCHNMNIWGQIWPKAVYLVCNYSPKGNW 212

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16995NP_608668.2 SCP_GAPR-1_like 5..125 CDD:240182 34/148 (23%)
Crispld1NP_001128435.1 SCP_euk 63..207 CDD:240180 37/151 (25%)
LCCL 291..375 CDD:128866
LCCL 394..492 CDD:281766
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X35
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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