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Protein Alignment CG16995 and vap-1
DIOPT Version :9
Sequence 1: | NP_608668.2 |
Gene: | CG16995 / 33413 |
FlyBaseID: | FBgn0031412 |
Length: | 146 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001024553.1 |
Gene: | vap-1 / 181768 |
WormBaseID: | WBGene00006886 |
Length: | 424 |
Species: | Caenorhabditis elegans |
Alignment Length: | 162 |
Identity: | 46/162 - (28%) |
Similarity: | 66/162 - (40%) |
Gaps: | 30/162 - (18%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 AQQFEQEVLQAHNLYR------------AKHGAQPLTLS-PKLNRLAT------EWANYLLSRNR 48
:.|..|..|..||..| |.....|:... |||....| .||...|.::.
Worm 232 SDQARQNFLDTHNKLRTSLAKGLEADGIAAGAFAPMAKQMPKLKYSCTVEANARTWAKGCLYQHS 296
Fly 49 MEHRQNSGYGENIYMASGGNL----KGADAVRSWYEEIRQYNWNSPS------FQGNTGHFTQVV 103
.. .|..|.|||:||.|..|: ...|:.::|:.|::.:...|.: |....||:||:.
Worm 297 TS-AQRPGLGENLYMISINNMPKIQTAEDSSKAWWSELKDFGVGSDNILTQAVFDRGVGHYTQMA 360
Fly 104 WKSSTELGVGFAKSGSTIYVVCNYNPPGNYNN 135
|:.:||:|.......:..|.||.|.|.|||.|
Worm 361 WEGTTEIGCFVENCPTFTYSVCQYGPAGNYMN 392
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CG16995 | NP_608668.2 |
SCP_GAPR-1_like |
5..125 |
CDD:240182 |
38/148 (26%) |
vap-1 | NP_001024553.1 |
SCP |
31..175 |
CDD:214553 |
|
SCP |
234..386 |
CDD:214553 |
41/152 (27%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
0 | 0.000 |
Not matched by this tool. |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1528782at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X35 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.920 |
|
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