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Protein Alignment CG16995 and vap-2
DIOPT Version :9
Sequence 1: | NP_608668.2 |
Gene: | CG16995 / 33413 |
FlyBaseID: | FBgn0031412 |
Length: | 146 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001300377.1 |
Gene: | vap-2 / 181273 |
WormBaseID: | WBGene00011462 |
Length: | 507 |
Species: | Caenorhabditis elegans |
Alignment Length: | 159 |
Identity: | 45/159 - (28%) |
Similarity: | 66/159 - (41%) |
Gaps: | 38/159 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 11 LQAHNLYRAK------HGAQPLTLSPK------------LNRLATEWANYLLSRNRMEHRQNSGY 57
|:.||.||:: ...:..|..|| |.|.|..|||..:..: ..|.:....
Worm 320 LEQHNFYRSRLAKGFEWNGETNTSQPKASQMIKMEYDCMLERFAQNWANNCVFAH-SAHYERPNQ 383
Fly 58 GENIYMASGGNLKGAD----AVRSWYEEIRQYN-----------WNSPSFQGNT-GHFTQVVWKS 106
|:|:||:|..|..... ||..|::|:.::. |: .:|.. ||:||:.|..
Worm 384 GQNLYMSSFSNPDPRSLIHTAVEKWWQELEEFGTPIDNVLTPELWD---LKGKAIGHYTQMAWDR 445
Fly 107 STELGVGFAKSGSTIYVVCNYNPPGNYNN 135
:..||.|.|......||||:|.|.||..|
Worm 446 TYRLGCGIANCPKMSYVVCHYGPAGNRKN 474
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
CG16995 | NP_608668.2 |
SCP_GAPR-1_like |
5..125 |
CDD:240182 |
38/147 (26%) |
vap-2 | NP_001300377.1 |
SCP |
104..253 |
CDD:214553 |
|
SCP |
315..468 |
CDD:214553 |
41/151 (27%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG2340 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1528782at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X35 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
4 | 3.820 |
|
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