DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG16995 and R3hdml

DIOPT Version :9

Sequence 1:NP_608668.2 Gene:CG16995 / 33413 FlyBaseID:FBgn0031412 Length:146 Species:Drosophila melanogaster
Sequence 2:NP_001092801.1 Gene:R3hdml / 100043899 MGIID:3650937 Length:253 Species:Mus musculus


Alignment Length:162 Identity:47/162 - (29%)
Similarity:66/162 - (40%) Gaps:40/162 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MSAQQFEQEVLQAHNLYRAK-H----GAQPLTLSPKLNRLATEWANYLL----SRNRMEHRQNSG 56
            |||      :|..||..||. |    ..:.:....:|.|.|..||...:    ....|::     
Mouse    63 MSA------LLDYHNHIRASVHPPAANMEYMVWDEQLARSAEAWATQCIWTHGPSQLMKY----- 116

  Fly    57 YGENIYMASGGNLKGADAVRSWYEEIRQYNWNSPS---------FQGNT-GHFTQVVWKSSTELG 111
            .|:|:.:.||......|.||||.||.|.|::.:|.         ..|.. .|:||:||.||:.||
Mouse   117 VGQNLSIHSGRFRSVVDLVRSWSEEKRHYSFPAPKDCTPHCPWLCSGPVCSHYTQMVWASSSRLG 181

  Fly   112 VGFAKSGS----------TIYVVCNYNPPGNY 133
            .......|          .:|:||||...||:
Mouse   182 CAINTCSSINVWGNTWQQAVYLVCNYAIKGNW 213

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG16995NP_608668.2 SCP_GAPR-1_like 5..125 CDD:240182 38/148 (26%)
R3hdmlNP_001092801.1 CAP_R3HDML 63..208 CDD:349409 44/155 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X35
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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