DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17237 and TNNC1

DIOPT Version :10

Sequence 1:NP_608666.1 Gene:CG17237 / 33411 FlyBaseID:FBgn0031410 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_003271.1 Gene:TNNC1 / 7134 HGNCID:11943 Length:161 Species:Homo sapiens


Alignment Length:155 Identity:42/155 - (27%)
Similarity:71/155 - (45%) Gaps:23/155 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 EKSRIMEMHAIF-LGHDTRGDNKISIRHLGHCLRAMGATPTEAMVSKHVRQYEASTMQRICFDEV 104
            :|:.......|| ||.:   |..||.:.||..:|.:|..||...:.:.:.:.:......:.|||.
Human    16 QKNEFKAAFDIFVLGAE---DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77

  Fly   105 MGIY------SSLGKHGGMLSPKKKQIEADQFVSSLRVFDTDKSGWIPAIRLRRILTKTGECMGS 163
            :.:.      .|.||....||        |.|    |:||.:..|:|....|:.:|..|||.:..
Human    78 LVMMVRCMKDDSKGKSEEELS--------DLF----RMFDKNADGYIDLDELKIMLQATGETITE 130

  Fly   164 MEVDELLQ-GRINKDGLVDYKKLVQ 187
            .:::||:: |..|.||.:||.:.::
Human   131 DDIEELMKDGDKNNDGRIDYDEFLE 155

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17237NP_608666.1 PTZ00184 45..187 CDD:185504 41/149 (28%)
TNNC1NP_003271.1 PTZ00184 9..157 CDD:185504 42/155 (27%)

Return to query results.
Submit another query.