DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17237 and myl4

DIOPT Version :9

Sequence 1:NP_608666.1 Gene:CG17237 / 33411 FlyBaseID:FBgn0031410 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_001020354.1 Gene:myl4 / 574004 ZFINID:ZDB-GENE-050626-112 Length:187 Species:Danio rerio


Alignment Length:197 Identity:55/197 - (27%)
Similarity:89/197 - (45%) Gaps:32/197 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 PSSTTPDCNQKRRGDMTAPPPNPKPEKSRIMEMHAIFLG-----------------HDTRGDNKI 63
            |....|    |:.....||||.|:..|....::.:|.:|                 .....:.||
Zfish     3 PKKAEP----KKEAAKPAPPPEPEKPKEPQFDLKSIKVGFTADQIEEFKETFMLFDRTPASEMKI 63

  Fly    64 SIRHLGHCLRAMGATPTEAMVSKHV---RQYEASTMQRICFDEVMGIYSSLGKHGGMLSPKKKQI 125
            :....|..:||:|..||.|.|.|.:   |..|.:| :.|.|:..:.::    :|   :|..|.|.
Zfish    64 TYAQCGDVMRALGLNPTNAEVLKVLGKPRPEEMNT-KMIDFETFLPMF----QH---VSRSKDQG 120

  Fly   126 EADQFVSSLRVFDTDKSGWIPAIRLRRILTKTGECMGSMEVDELLQGRINKDGLVDYKKLVQDII 190
            ..:.||..|||||.:.:|.:....||.:|...||.|...||::|:.|:.:.:|.|:|:..|:.|:
Zfish   121 TFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTESEVEQLMAGQEDGNGCVNYEAFVKHIM 185

  Fly   191 YG 192
            .|
Zfish   186 AG 187

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17237NP_608666.1 PTZ00184 45..187 CDD:185504 43/161 (27%)
EFh 129..187 CDD:298682 21/57 (37%)
myl4NP_001020354.1 PTZ00184 39..186 CDD:185504 43/154 (28%)
EFh 124..185 CDD:238008 22/60 (37%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0030
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR23048
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.910

Return to query results.
Submit another query.