DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17237 and myl13

DIOPT Version :10

Sequence 1:NP_608666.1 Gene:CG17237 / 33411 FlyBaseID:FBgn0031410 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_956810.1 Gene:myl13 / 393488 ZFINID:ZDB-GENE-040426-1593 Length:186 Species:Danio rerio


Alignment Length:180 Identity:50/180 - (27%)
Similarity:82/180 - (45%) Gaps:27/180 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 AP-PPNPKPEK---------------SRIMEMHAIFLGHDTRGDN--KISIRHLGHCLRAMGATP 79
            || ||.|:|.|               .:|.:....|...|....|  ||:....|..:||:|..|
Zfish    14 APKPPEPEPPKEPEFNAAEVQIEFTAEQIEDFKDAFQLFDRTPTNEMKITFAQCGDLIRALGQNP 78

  Fly    80 TEAMVSKHVRQYEASTMQ--RICFDEVMGIYSSLGKHGGMLSPKKKQIEADQFVSSLRVFDTDKS 142
            |.|.|...:.:.:...||  .:.||:.:.::..:.|       .|.:...:.||..|||||.:.:
Zfish    79 TNAEVLHVLGKPKPEDMQVKMLDFDQFLPMHQHICK-------AKDRGTFEDFVEGLRVFDKEGN 136

  Fly   143 GWIPAIRLRRILTKTGECMGSMEVDELLQGRINKDGLVDYKKLVQDIIYG 192
            |.:....||.:|...||.|...||::|:.|:.:.:|.::|:..|:.|:.|
Zfish   137 GTVMGAELRHVLATLGEKMKEDEVEQLMAGQEDANGCINYEAFVKHIMAG 186

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17237NP_608666.1 PTZ00184 45..187 CDD:185504 40/145 (28%)
myl13NP_956810.1 PTZ00184 34..185 CDD:185504 42/157 (27%)

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