DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17237 and Calml3

DIOPT Version :10

Sequence 1:NP_608666.1 Gene:CG17237 / 33411 FlyBaseID:FBgn0031410 Length:192 Species:Drosophila melanogaster
Sequence 2:NP_001012054.1 Gene:Calml3 / 307100 RGDID:1305499 Length:149 Species:Rattus norvegicus


Alignment Length:151 Identity:44/151 - (29%)
Similarity:78/151 - (51%) Gaps:12/151 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    42 KSRIMEMHAIFLGHDTRGDNKISIRHLGHCLRAMGATPTEAMVSKHVRQYEASTMQRICFDEVMG 106
            :.:|.|....|...|..||..|:.:.||..:|::|..||||.:...|.:.:......:.|.|.: 
  Rat     7 EEQIAEFKEAFSLFDKDGDGCITTQELGTVMRSLGQNPTEAELQDMVNEIDKDGNGTVDFPEFL- 70

  Fly   107 IYSSLGKHGGMLSPKKKQIEADQFV-SSLRVFDTDKSGWIPAIRLRRILTKTGECMGSMEVDELL 170
                     .|:|.|.|..::::.: .:.||||.|.:|::.|..||.::|:.||.:...||||::
  Rat    71 ---------TMMSRKMKDTDSEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMI 126

  Fly   171 QGR-INKDGLVDYKKLVQDII 190
            |.. .:.||.|:|::.|..::
  Rat   127 QAADTDGDGQVNYEEFVHMLV 147

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17237NP_608666.1 PTZ00184 45..187 CDD:185504 43/143 (30%)
Calml3NP_001012054.1 PTZ00184 1..149 CDD:185504 44/151 (29%)

Return to query results.
Submit another query.