DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG17237 and cabp2

DIOPT Version :10

Sequence 1:NP_608666.1 Gene:CG17237 / 33411 FlyBaseID:FBgn0031410 Length:192 Species:Drosophila melanogaster
Sequence 2:XP_031762361.1 Gene:cabp2 / 100487419 XenbaseID:XB-GENE-22068145 Length:140 Species:Xenopus tropicalis


Alignment Length:143 Identity:44/143 - (30%)
Similarity:69/143 - (48%) Gaps:13/143 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    46 MEMHAIFLGHDTRGDNKISIRHLGHCLRAMGATPTEAMVSKHVRQYEASTMQRICFD---EVMGI 107
            |::...|...|...|..|..:.||||:|.||..|||..:.:..::...|...::.||   |:|| 
 Frog     1 MQLKEAFQEFDRDKDGFIGHKELGHCMRTMGYMPTEMELIELSQKIRLSLGGKVDFDDFVELMG- 64

  Fly   108 YSSLGKHGGMLSPKKKQIEADQFVSSLRVFDTDKSGWIPAIRLRRILTK-TGECMGSMEVDELLQ 171
                   ..:|:.....|...:...:.|.||::..|.|....||..:.| .|:.:|..:|||:||
 Frog    65 -------PKLLAETADMIGVKELRDAFREFDSNGDGRISTHELREAMKKLLGQQLGPCDVDEILQ 122

  Fly   172 G-RINKDGLVDYK 183
            . .:|.|||||::
 Frog   123 DVDVNGDGLVDFE 135

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17237NP_608666.1 PTZ00184 45..187 CDD:185504 44/143 (31%)
cabp2XP_031762361.1 PTZ00184 2..135 CDD:185504 43/140 (31%)

Return to query results.
Submit another query.