DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG17237 and cabp1

DIOPT Version :9

Sequence 1:NP_608666.1 Gene:CG17237 / 33411 FlyBaseID:FBgn0031410 Length:192 Species:Drosophila melanogaster
Sequence 2:XP_012810029.1 Gene:cabp1 / 100135743 XenbaseID:XB-GENE-854621 Length:401 Species:Xenopus tropicalis


Alignment Length:247 Identity:55/247 - (22%)
Similarity:94/247 - (38%) Gaps:75/247 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 QLHPSS-----------IRPSSTTPDCNQ-----------------KRR---------GDMTAPP 35
            |.:|||           :.|...||...|                 ||:         .:.::.|
 Frog   159 QQNPSSRHPAHHTREYPVSPREQTPSPRQLPHSPKELQEGADEQKVKRKENVKSSDGVSNQSSKP 223

  Fly    36 PNPKPE---KSRIMEMHAI----------------------FLGHDTRGDNKISIRHLGHCLRAM 75
            .|.:||   :...:|:|.|                      |...|...|..||.:.||.|:|.|
 Frog   224 SNNEPEAETEPLFVELHPILSSVFGQDRELRPEEIEELKEAFKEFDKDKDGYISCKDLGDCMRTM 288

  Fly    76 GATPTEAMVSKHVRQYEASTMQRICFD---EVMGIYSSLGKHGGMLSPKKKQIEADQFVSSLRVF 137
            |..|||..:.:..:|...:....:.||   |:||        ..:|:.....|...:...:.:.|
 Frog   289 GYMPTEMELIELSQQINMNLGGHVDFDDFVELMG--------PKLLAETADMIGVKELRDAFKEF 345

  Fly   138 DTDKSGWIPAIRLRRILTK-TGECMGSMEVDELLQG-RINKDGLVDYKKLVQ 187
            ||:..|.|....||..:.| .|:.:|..:::::::. .:|.||.||:::.|:
 Frog   346 DTNGDGEISMSELREAMKKLLGQQVGHRDIEDIIRDVDLNGDGQVDFEEFVR 397

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG17237NP_608666.1 PTZ00184 45..187 CDD:185504 40/168 (24%)
EFh 129..187 CDD:298682 15/59 (25%)
cabp1XP_012810029.1 ROM1 45..>245 CDD:227709 17/85 (20%)
PTZ00184 252..399 CDD:185504 38/154 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1424914at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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