DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sec24CD and SFB2

DIOPT Version :9

Sequence 1:NP_001259918.1 Gene:Sec24CD / 33409 FlyBaseID:FBgn0262126 Length:1231 Species:Drosophila melanogaster
Sequence 2:NP_014349.1 Gene:SFB2 / 855678 SGDID:S000004994 Length:876 Species:Saccharomyces cerevisiae


Alignment Length:864 Identity:231/864 - (26%)
Similarity:413/864 - (47%) Gaps:113/864 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   414 QQAPQARRLDPDQMPNPIQVMIENQRLSGGPFVTNQ-----------PGL----LPPLVTT---- 459
            |.|.....|..:...|....:.:||:..|...|.||           |.:    ||||..|    
Yeast    35 QTAYAMGNLQLNNRANSFTQLAQNQQFPGSGKVVNQLYPVDLFTELPPPIRDLSLPPLPITISQD 99

  Fly   460 KFVVHDQGNSSP-RFLRSSLYCIPNTGDLLKTTALPLTLNISPLAKVGEGEMEPPIVNFGEMGPI 523
            ..|...:.::.| :::||:|..:|.|..|||.|.||..:.|.|...:.:.:.:.|:...|.:  :
Yeast   100 NIVTPSEYSNVPYQYVRSTLKAVPKTNSLLKKTKLPFAIVIRPYLHLQDSDNQVPLNTDGVI--V 162

  Fly   524 RCNRCKAYMSPNMQFVDAGRRFQCLMCKVTSEVHQNYYQHLDHTGQRVDKHERPELLLGTYEFLA 588
            ||.||::||:|.:.|::.||::||.:|:..::|...:.|:|.  |..::::||.|:.....::||
Yeast   163 RCRRCRSYMNPFVVFINQGRKWQCNICRFKNDVPFGFDQNLQ--GAPINRYERNEIKNSVVDYLA 225

  Fly   589 TKDYCRNNTPPEVPAFIFIIDVSYNTVKSGLVHLLCSQIKNILKHLPVDQGQDKSKVRVGFITYN 653
            ..:|.....||.|  ::|::|||.|.||:||:......|...::.||...|    :.|:..|..:
Yeast   226 PVEYSVREPPPSV--YVFLLDVSQNAVKNGLLATSARTILENIEFLPNHDG----RTRIAIICVD 284

  Fly   654 STVHFYNIK-----------------------------SSLAQPQMMVVGDVQEMFMPLLDGFLC 689
            .::|::.:.                             .:....||..:||:.|.|:|:      
Yeast   285 HSLHYFYVPLDDDYEVSDEDDEESDGEEEDEDEEEEDVDNSETIQMFDIGDLDEPFLPM------ 343

  Fly   690 HPEESAAV--------IDALMEEIPRMFADTKETETILYPAIQAGLEALKASNAAGKLLVFNSTL 746
             |.:...|        ::.|:::||.:|.||..::..|.||::|....:|::  .||:.|.:|||
Yeast   344 -PSDELVVPLKYCKNNLETLLKKIPEIFQDTHSSKFALGPALKAASNLIKST--GGKVEVISSTL 405

  Fly   747 PIAEAPGKLKNRDDRKLLGTDKEKT-VLTPQTTAYNTLGQECVQQGCSVDLFVFNNAYIDLATIG 810
            | ....||||.|.::.:|.|.||.: :|:.:.:.|.|...||.:...:||:|:.:..|:|:||:.
Yeast   406 P-NTGIGKLKKRSEQGILNTPKESSQLLSCKDSFYKTFTIECNKLQITVDMFLASEDYMDVATLS 469

  Fly   811 QVSRLTGGEVFKYTYFQADV--DGKRLIQDIIKNVSRPIAFDAVMRVRTSAGIRPTEFYGHFFMS 873
            .:.|.:||:...|..|.|..  |..:..:::.:::|..|:.:||||||.|.|:|.|.|:||||..
Yeast   470 HLGRFSGGQTHFYPGFNATSLNDVTKFTRELSRHLSMDISMEAVMRVRCSTGLRATSFFGHFFNR 534

  Fly   874 NTTDVELASIDATKSISIEIKHDDKLAPEENVYLQVALLYTSCSGQRRLRILNLALRVTTTIADV 938
            ::.....:::...:|....|..:|.|. .|..||||:.|.|..:|:||:|::.|||..:.:..:|
Yeast   535 SSDLCAFSTMPRDQSYLFGISIEDSLM-AEYCYLQVSTLLTLNTGERRIRVMTLALPTSESAREV 598

  Fly   939 FKCCDLDAMMLFFAKQACFKLMEHSPKQVKDNLIHRSAQILACYRKH--CTSPTSAGQLILPECL 1001
            |...|..|:..|..:.|..|.:..|....:|.:......||..|:|.  .::..|...|.|...|
Yeast   599 FASADQLAITDFMTQNAVTKALNSSMYSARDFITKSLEDILNAYKKEISMSNINSVTSLNLCANL 663

  Fly  1002 KLLPLYASCLLKNDAISGGSDMTLDDRSYVIQFILSMDLNQSVSYLYPRFIPIHNVVPEE----- 1061
            ::|||..:.|.|:.|:..|. :..|.|:..:..:.:..|:..:..:||....:|: :|:|     
Yeast   664 RMLPLLMNGLSKHIALRPGV-VPSDYRASALNRLETEPLHYLIKSIYPTVYSLHD-MPDEVGLPD 726

  Fly  1062 ----TDLPTPVRCTHEKTQEDGAYILENGVHLFVWLGQALSPDFVQSVFGVQGLQQIAL--ERFN 1120
                |.||.|:..|....:..|.|:::|...||:|:|....|:.:..||....:.||.:  ....
Yeast   727 FEGKTVLPEPINATISLFERYGLYLIDNSAELFLWVGGDAVPELLIDVFNTDTISQIPVGKSELP 791

  Fly  1121 IVPETPLAKRIHGILEQIMKERS--RYMRITWLR----------QNDKLESVFRHF----LVEDR 1169
            ::.::|..:|:..|:.:|.:...  .:..:..:|          .::|..:..|.:    ||||:
Yeast   792 LLNDSPFNERLRRIIGRIRENNDTITFQSLYIIRGPSINEPANLNSEKDMASLRLWVLSTLVEDK 856

  Fly  1170 GTDGSASYVDFLCHMHKEI 1188
            ..: .|||.::|..|...|
Yeast   857 VLN-CASYREYLQSMKTSI 874

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec24CDNP_001259918.1 COG5028 395..1190 CDD:227361 231/864 (27%)
zf-Sec23_Sec24 522..559 CDD:282641 14/36 (39%)
Sec24-like 599..847 CDD:238756 74/287 (26%)
Sec23_BS 848..932 CDD:285301 33/83 (40%)
Sec23_helical 950..1043 CDD:282646 23/94 (24%)
Gelsolin 1061..1135 CDD:279020 20/84 (24%)
SFB2NP_014349.1 COG5028 1..876 CDD:227361 231/864 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 43 1.000 Domainoid score I3176
eggNOG 1 0.900 - - E1_COG5028
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53542
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.820

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