DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sec24CD and AT4G32640

DIOPT Version :9

Sequence 1:NP_001259918.1 Gene:Sec24CD / 33409 FlyBaseID:FBgn0262126 Length:1231 Species:Drosophila melanogaster
Sequence 2:NP_001119101.5 Gene:AT4G32640 / 829399 AraportID:AT4G32640 Length:1080 Species:Arabidopsis thaliana


Alignment Length:1156 Identity:390/1156 - (33%)
Similarity:570/1156 - (49%) Gaps:159/1156 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 APPPTGFNQFNSNAAPPPTNNNNAAFGAPPPTQAGSYVNGALPPSSTPQSVASGINQMSLNSATL 175
            ||.|.|        ||.|.:..|:   .||....||..|.        .::|..:..:|||    
plant     3 APVPPG--------APRPNSQQNS---GPPNFYPGSQGNS--------NALADNMQNLSLN---- 44

  Fly   176 AGLPHMPPPKAATPGAAPGQPPIPAAGSTSQPPLPGQPPLPGQPPFSGQIPTSQPAPSPYGVPSS 240
                 .|||  ..||:.| :|| |..|.:.| |.|.|.|..|.|. .|..|.|:|.| |.|:  :
plant    45 -----RPPP--MMPGSGP-RPP-PPFGQSPQ-PFPQQSPSYGAPQ-RGPSPMSRPGP-PAGM--A 95

  Fly   241 RPGQPQLPPGATPPTYTQPGLPPQQQQGIPPLQQ---------PGIPQQQP-----GFPPQQP-- 289
            |||.|  ||.:.|..: |..:|..:..| ||.:|         ||.|..||     |||...|  
plant    96 RPGGP--PPVSQPAGF-QSNVPLNRPTG-PPSRQPSFGSRPSMPGGPVAQPAASSSGFPAFGPSG 156

  Fly   290 ----GLPPLSQP---GLPP--------QPGAPYGAPQQGGY----SGGFPGQAPGGFPGAPPPLP 335
                |.||.|:|   |.||        .|....|.|...|:    |||||....  ||||....|
plant   157 SVAAGPPPGSRPMAFGSPPPVGSGMSMPPSGMIGGPVSNGHQMVGSGGFPRGTQ--FPGAAVTTP 219

  Fly   336 GQQAAAPPQFGAPQPGYPGQQPGYPPQPGQQPM-----PGYPPQ---PGQQLGGPGY------PP 386
            ......||  .||....|.|..|.....|..|:     |..||.   ||...|.|..      ||
plant   220 QAPYVRPP--SAPYARTPPQPLGSHSLSGNPPLTPFTAPSMPPPATFPGAPHGRPAVSGLPYGPP 282

  Fly   387 Q----PGAGFPGQPGRPGFNQPPMP---------GAGNMYQQAPQARRLDPDQMPNPIQVMIENQ 438
            .    |..|||||...|.:...|:|         ..|......|...|:||:|:|.|        
plant   283 SAQVAPPLGFPGQMQPPRYGMGPLPNQSMTNIPTAMGQPGATVPGPSRIDPNQIPRP-------- 339

  Fly   439 RLSGGP--FVTNQPGLL--PPLVTTKFVVHDQGNSSPRFLRSSLYCIPNTGDLLKTTALPLTLNI 499
            ..|..|  |.|.|....  ||..|:.:||.|.||.|||::|.::..||.|.|||.|:.:.|.|.:
plant   340 GSSSSPTVFETRQSNQANPPPPATSDYVVRDTGNCSPRYMRCTINQIPCTVDLLSTSGMQLALMV 404

  Fly   500 SPLAKVGEGEMEPPIVNFGEMGPIRCNRCKAYMSPNMQFVDAGRRFQCLMCKVTSEVHQNYYQHL 564
            .|||.....|....:|:|||.||:||:|||.|::|.|:|:|.||:|.|..|..|.|..::|:.:|
plant   405 QPLALSHPSEEPIQVVDFGEGGPVRCSRCKGYINPFMKFIDQGRKFICNFCGYTDETPRDYHCNL 469

  Fly   565 DHTGQRVDKHERPELLLGTYEFLATKDYCRNNTPPEVPAFIFIIDVSYNTVKSGLVHLLCSQIKN 629
            ...|:|.|..|||||..||.||:|||:|...:..|.|  :.|:||||.|.:::|.....|:.|:.
plant   470 GPDGRRRDVDERPELCRGTVEFVATKEYMVRDPMPAV--YFFLIDVSMNAIQTGATAAACNAIQQ 532

  Fly   630 ILKHLPVDQGQDKSKVRVGFITYNSTVHFYNIKSSLAQPQMMVVGDVQEMFMPLLDGFLCHPEES 694
            :|..||     :..:..||..|::||:||||:|.:|.||.|::|.|||:::.||....:....|.
plant   533 VLSDLP-----EGPRTFVGIATFDSTIHFYNLKRALQQPLMLIVPDVQDVYTPLETDVVVQLSEC 592

  Fly   695 AAVIDALMEEIPRMFADTKETETILYPAIQAGLEALKASNAAGKLLVFNSTLPIAEAPGKLKNRD 759
            ...::.|::.||.||.::|..|:....|::|...|:|:.  .|||:||.|.| .:...|.|.:|:
plant   593 RQHLELLLDSIPTMFQESKIPESAFGAAVKAAFLAMKSK--GGKLMVFQSIL-CSVGVGALSSRE 654

  Fly   760 DR---KLLGTDKE-KTVLTPQTTAYNTLGQECVQQGCSVDLFVFNNAYIDLATIGQVSRLTGGEV 820
            ..   .:...:|| ..:|.|......|:..|..:....||:|:...||:|:|:|..:.|.|||:|
plant   655 AEGRANMSAGEKEAHKLLQPADKTLKTMAIEFAEYQVCVDIFITTQAYVDMASISVIPRTTGGQV 719

  Fly   821 FKYTYFQADVDGKRLIQDIIKNVSRPIAFDAVMRVRTSAGIRPTEFYGHFFMSNTTDVELASIDA 885
            :.|..|.|..|..:|..|:..|::||..|:||||||.|.||:..|:.|:|.....||::|.:   
plant   720 YCYYPFSALSDPPKLYNDLKWNITRPQGFEAVMRVRCSQGIQVQEYSGNFCKRIPTDIDLPA--- 781

  Fly   886 TKSISIEIKHDDKLAPEENVYLQVALLYTSCSGQRRLRILNLALRVTTTIADVFKCCDLDAMMLF 950
                     |||||........|.|||||:..|:||:|:..|:|..|..::::|:..|||:....
plant   782 ---------HDDKLQDGAECAFQCALLYTTIYGERRIRVTTLSLSCTNMLSNLFRAADLDSQFAC 837

  Fly   951 FAKQACFKLMEHSPKQVKDNLIHRSAQILACYRKHCTSPTSAGQLILPECLKLLPLYASCLLKND 1015
            ..|||..::...:...||:...:.....|..|||.|.:.||:|||||||.|||.|||...|.|:.
plant   838 MLKQAANEIPSKALPLVKEQATNSCINALYAYRKFCATVTSSGQLILPEALKLFPLYTLALTKSV 902

  Fly  1016 AISGGSDMTLDDRSYVIQFILSMDLNQSVSYLYPRFIPIHNVVPEETD---LPTPVRCTHEKTQE 1077
            .:.  :|..:||||:.|.::.|:....::..:|||.|.:|::..::|:   ||.|:..:.|....
plant   903 GLR--TDGRIDDRSFWINYVSSLSTPLAIPLVYPRMISVHDLDVKDTEGSVLPPPIPLSSEHISN 965

  Fly  1078 DGAYILENGVHLFVWLGQALSPDFVQSVFGVQGL----QQIALERFNIVPETPLAKRIHGILEQI 1138
            :|.|.||||....:::|:::..|.:|.:|.|...    .|..|:::    :..|:|:.:..:.:|
plant   966 EGVYFLENGEDGLLFVGESVDSDILQKLFAVSSAAEIPNQFVLQQY----DNQLSKKFNDAVNEI 1026

  Fly  1139 MKERSRYMRITWLRQNDKLESVFRHFLVEDRGTDGSASYVDFLCHMHKEIK 1189
            .::|..|:||...::.:....:|..::||||...| .|||:||..:|::|:
plant  1027 RRQRCSYLRIKLCKKGEPSGMLFLSYMVEDRTASG-PSYVEFLVQVHRQIQ 1076

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec24CDNP_001259918.1 COG5028 395..1190 CDD:227361 282/819 (34%)
zf-Sec23_Sec24 522..559 CDD:282641 18/36 (50%)
Sec24-like 599..847 CDD:238756 83/251 (33%)
Sec23_BS 848..932 CDD:285301 33/83 (40%)
Sec23_helical 950..1043 CDD:282646 34/92 (37%)
Gelsolin 1061..1135 CDD:279020 20/80 (25%)
AT4G32640NP_001119101.5 PHA03247 <65..345 CDD:223021 94/300 (31%)
COG5028 273..1076 CDD:227361 288/839 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 142 1.000 Domainoid score I1514
eggNOG 1 0.900 - - E1_COG5028
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 586 1.000 Inparanoid score I233
OMA 1 1.010 - - QHG53542
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001889
OrthoInspector 1 1.000 - - otm3294
orthoMCL 1 0.900 - - OOG6_101536
Panther 1 1.100 - - LDO PTHR13803
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1423
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.830

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