DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sec24CD and sec24c

DIOPT Version :9

Sequence 1:NP_001259918.1 Gene:Sec24CD / 33409 FlyBaseID:FBgn0262126 Length:1231 Species:Drosophila melanogaster
Sequence 2:XP_031760998.1 Gene:sec24c / 733829 XenbaseID:XB-GENE-1003364 Length:1184 Species:Xenopus tropicalis


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec24CDNP_001259918.1 COG5028 395..1190 CDD:227361
zf-Sec23_Sec24 522..559 CDD:282641
Sec24-like 599..847 CDD:238756
Sec23_BS 848..932 CDD:285301
Sec23_helical 950..1043 CDD:282646
Gelsolin 1061..1135 CDD:279020
sec24cXP_031760998.1 PHA03247 <92..445 CDD:223021
COG5028 303..1180 CDD:227361
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 317 1.000 Domainoid score I1262
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 970 1.000 Inparanoid score I322
OMA 1 1.010 - - QHG53542
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001889
OrthoInspector 1 1.000 - - otm48025
Panther 1 1.100 - - LDO PTHR13803
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1423
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.070

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