Sequence 1: | NP_001259918.1 | Gene: | Sec24CD / 33409 | FlyBaseID: | FBgn0262126 | Length: | 1231 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038958034.1 | Gene: | Sec24b / 295461 | RGDID: | 1309358 | Length: | 1294 | Species: | Rattus norvegicus |
Alignment Length: | 1379 | Identity: | 381/1379 - (27%) |
---|---|---|---|
Similarity: | 583/1379 - (42%) | Gaps: | 302/1379 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 20 GAPPPNSGG-WPPQ-QQQLPQQQPPQQQLPPQQQQQQPQ-YGAPPPTSAASQPYLNGNYQQQLAT 81
Fly 82 SMGGLSVGGGVGGANPL-------------KPPLPQGAPAAAAPPPTGFNQFNSNAAPPPTNNNN 133
Fly 134 AAFGAPPPTQAGSYVNGALPPSSTPQSVASGINQMSLNSATLAGLPHMPPPKAATPG-AAPGQP- 196
Fly 197 -----PIPAAGSTSQPPLPGQPPLPGQPPFSGQIPTSQPAPSP-------YGVPSSRPGQPQLPP 249
Fly 250 GATPPTYTQPGLPPQQQQGIPPLQQ------PGIPQQQPGFPPQQPGL---------PPLSQPGL 299
Fly 300 ---------------PPQPGAPYGAPQQGGYSGGFPGQAP----GGFPGAPP-----------PL 334
Fly 335 P----------------------GQQAAAPP--------QFG----------------------- 346
Fly 347 ------------------APQP-GYPGQQPG-YP---PQPGQQPMPGYPPQPGQQL--------- 379
Fly 380 ------GGPGYPP-QP---------------GAGFPGQPGR-PGFNQPPMPGAGNMYQQAPQARR 421
Fly 422 LDPDQMPNPIQVMIENQRLSGGPFVTNQPGLLPPLVTTKFVVHDQGNSSPRFLRSSLYCIPNTGD 486
Fly 487 LLKTTALPLTLNISPLAKVGEGEMEPPIVNFGEMGPIRCNRCKAYMSPNMQFVDAGRRFQCLMCK 551
Fly 552 VTSEVHQNY-YQHLDHTGQRVDKHERPELLLGTYEFLATKDYCRNNTPPEVPAFIFIIDVSYNTV 615
Fly 616 KSGLVHLLCSQIKNILKHLPVDQGQDKSKVRVGFITYNSTVHFYNIKSSLAQPQMMVVGDVQEMF 680
Fly 681 MPLLDGFLCHPEESAAVIDALMEEIPRMFADTKETETILYPAIQAGLEALKASNAAGKLLVFNST 745
Fly 746 LPIAEAPGKLKNRDDRKLLGTDKEKTVLTPQTTAYNTLGQECVQQGCSVDLFVFNNAYIDLATIG 810
Fly 811 QVSRLTGGEVFKYTYFQA---DVDGKRLIQDIIKNVSRPIAFDAVMRVRTSAGIRPTEFYGHFFM 872
Fly 873 SNTTDVELASIDATKSISIEIKHDDKLAPEENVYLQVALLYTSCSGQRRLRILNLALRVTTTIAD 937
Fly 938 VFKCCDLDAMMLFFAKQACFKLMEHSPKQVKDNLIHRSAQILACYRKHCTS-PTSAGQLILPECL 1001
Fly 1002 KLLPLYASCLLKNDAISGGSDMTLDDRSYVIQFILSMDLNQSVSYLYPRFIPIHNVVPE------ 1060
Fly 1061 ETDLPTP--VRCTHEKTQEDGAYILENGVHLFVWLGQALSPDFVQSVFGVQGLQQIALERFNIVP 1123
Fly 1124 ETPLAKRIHGILEQIMKERSRYMRITWLRQNDKLESV--------------FRHFLVEDRGTDGS 1174
Fly 1175 ASYVDFLCHMHKEI 1188 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Sec24CD | NP_001259918.1 | COG5028 | 395..1190 | CDD:227361 | 254/822 (31%) |
zf-Sec23_Sec24 | 522..559 | CDD:282641 | 12/36 (33%) | ||
Sec24-like | 599..847 | CDD:238756 | 86/250 (34%) | ||
Sec23_BS | 848..932 | CDD:285301 | 31/83 (37%) | ||
Sec23_helical | 950..1043 | CDD:282646 | 31/93 (33%) | ||
Gelsolin | 1061..1135 | CDD:279020 | 15/75 (20%) | ||
Sec24b | XP_038958034.1 | PHA03247 | <2..483 | CDD:223021 | 119/519 (23%) |
COG5028 | 448..1285 | CDD:227361 | 267/885 (30%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5028 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG53542 | |
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.820 |