DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Sec24CD and SEC24B

DIOPT Version :10

Sequence 1:NP_001259918.1 Gene:Sec24CD / 33409 FlyBaseID:FBgn0262126 Length:1231 Species:Drosophila melanogaster
Sequence 2:NP_001287742.1 Gene:SEC24B / 10427 HGNCID:10704 Length:1298 Species:Homo sapiens


Alignment Length:1323 Identity:368/1323 - (27%)
Similarity:567/1323 - (42%) Gaps:243/1323 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 GPPPTQFQQQPQFG-------APPPNSGGWPPQQQQLPQQQP-----------PQQQLPPQQQQQ 53
            ||...|.|....:|       ||..:....|.:...||....           |.|.:.|....|
Human    76 GPAQNQMQVPSGYGLHHQNYIAPSGHYSQGPGKMTSLPLDTQCGDYYSALYTVPTQNVTPNTVNQ 140

  Fly    54 QP----QYGAPPPT----------------------SAASQPYLN--GNY-------------QQ 77
            ||    .|...||.                      ::|||||.:  .:|             .|
Human   141 QPGAQQLYSRGPPAPHIVGSTLGSFQGAASSASHLHTSASQPYSSFVNHYNSPAMYSASSSVASQ 205

  Fly    78 QLATSMGGLSVGGGVGGANP--LKPPLPQGAPAAAAPPPTGFNQFNSNAAPP--PTNNN-----N 133
            ...::.|..::......|.|  ..|.||.|        .|....|.|..||.  |..:|     |
Human   206 GFPSTCGHYAMSTVSNAAYPSVSYPSLPAG--------DTYGQMFTSQNAPTVRPVKDNSFSGQN 262

  Fly   134 AAFGAPPPTQAGSYVNGALPPSST----PQSVASGINQMSLNSATLAGLP----HMPPPKAATPG 190
            .|...|.|          |||..:    .|...||.:.::.:|   .|||    ::......:..
Human   263 TAISHPSP----------LPPLPSQQHHQQQSLSGYSTLTWSS---PGLPSTQDNLIRNHTGSLA 314

  Fly   191 AAPGQPPIPAAGSTSQPPLPGQPPLPGQPPFSGQIPTSQPAPSPYGVPSSRPGQPQLPPGATPP- 254
            .|...|.|..|.|.|.|.:....|           |.|.|..|.....||.....:.||.|..| 
Human   315 VANNNPTITVADSLSCPVMQNVQP-----------PKSSPVVSTVLSGSSGSSSTRTPPTANHPV 368

  Fly   255 ----TYTQPGLPPQQQQGI--------------PPLQQPGIPQQQPGFPPQQPGLPPLS-QPGLP 300
                :.|||. ...||:|:              .||......:::.. ..::.|:...| .....
Human   369 EPVTSVTQPS-ELLQQKGVQYGEYVNNQASSAPTPLSSTSDDEEEEE-EDEEAGVDSSSTTSSAS 431

  Fly   301 PQPGAPYGAPQQGGYSGGFPGQAPGGFPG-APPPLPGQQAAAPPQFGAPQP-------------- 350
            |.|.: |.|.:.|.|.......|....|. ||.|.|   |:||....||.|              
Human   432 PMPNS-YDALEGGSYPDMLSSSASSPAPDPAPEPDP---ASAPAPASAPAPVVPQPSKMAKPFGY 492

  Fly   351 GYPGQQPGYPPQPGQQPMPGYPPQPGQQLGGPGYPPQPGAGFPGQPGRPGFNQPPMPGAGNMYQQ 415
            |||..||||  |....|:..     |.|...|.|     :||...|..||.||......|...|.
Human   493 GYPTLQPGY--QNATAPLIS-----GVQPSNPVY-----SGFQQYPQYPGVNQLSSSIGGLSLQS 545

  Fly   416 APQARRLDPDQMPNPIQVMIENQRLSGGPFVTNQPGLLPPLVTTKFVVHDQGNSSPRFLRSSLYC 480
            :||...|      .|:.:..|...|...|.....|.|...|        .:.|.||...|.:|..
Human   546 SPQPESL------RPVNLTQERNILPMTPVWAPVPNLNADL--------KKLNCSPDSFRCTLTN 596

  Fly   481 IPNTGDLLKTTALPLTLNISPLAKVGEGEMEPPIVNFGEMGPIRCNRCKAYMSPNMQFVDAGRRF 545
            ||.|..||....|||.|.:.|...:    .:.|::....:  :||..|:.|::|.:.|:|. ||:
Human   597 IPQTQALLNKAKLPLGLLLHPFRDL----TQLPVITSNTI--VRCRSCRTYINPFVSFIDQ-RRW 654

  Fly   546 QCLMCKVTSEVHQNY-YQHLDHTGQRVDKHERPELLLGTYEFLATKDYCRNNTPPEVPAFIFIID 609
            :|.:|...::|.:.: |..|  |....:.|:|||:...|.||:|:.||...  ||:...::|::|
Human   655 KCNLCYRVNDVPEEFMYNPL--TRSYGEPHKRPEVQNSTVEFIASSDYMLR--PPQPAVYLFVLD 715

  Fly   610 VSYNTVKSGLVHLLCSQIKNILKHLPVDQGQDKSKVRVGFITYNSTVHFYNIKSSLAQPQMMVVG 674
            ||:|.|::|.:.:||..:...|..||.|     |:.|:||:|::||:||||::..|:||||::|.
Human   716 VSHNAVEAGYLTILCQSLLENLDKLPGD-----SRTRIGFMTFDSTIHFYNLQEGLSQPQMLIVS 775

  Fly   675 DVQEMFMPLLDGFLCHPEESAAVIDALMEEIPRMFADTKETETILYPAIQAGLEALKASNAAGKL 739
            |:.::|:|..|..|.:..||..:|..|:..:|.||.:|:||.:.|.||:||..:.:  |...|::
Human   776 DIDDVFLPTPDSLLVNLYESKELIKDLLNALPNMFTNTRETHSALGPALQAAFKLM--SPTGGRV 838

  Fly   740 LVFNSTLPIAEAPGKLKNRDDRKLLGTDKEKTVLTPQTTAYNTLGQECVQQGCSVDLFVFNNAYI 804
            .||.:.||...| |.|::|:|.....:.|....|.|.|..|..|..:|..|..:||||:.::.|.
Human   839 SVFQTQLPSLGA-GLLQSREDPNQRSSTKVVQHLGPATDFYKKLALDCSGQQTAVDLFLLSSQYS 902

  Fly   805 DLATIGQVSRLTGGEVFKYTYF-------QADVDGKRLIQDIIKNVSRPIAFDAVMRVRTSAGIR 862
            |||::..:|:.:.|.::.|..|       ||:    :|.:|:.:.::|.|.|:||||:|.:.|:.
Human   903 DLASLACMSKYSAGCIYYYPSFHYTHNPSQAE----KLQKDLKRYLTRKIGFEAVMRIRCTKGLS 963

  Fly   863 PTEFYGHFFMSNTTDVELASIDATKSISIEIKHDDKLAPEENVYLQVALLYTSCSGQRRLRILNL 927
            ...|:|:||:.:|..:.||:|:.....::::..::.|.....|..|.||||||..|:||:|:..|
Human   964 MHTFHGNFFVRSTDLLSLANINPDAGFAVQLSIEESLTDTSLVCFQTALLYTSSKGERRIRVHTL 1028

  Fly   928 ALRVTTTIADVFKCCDLDAMMLFFAKQACFKLMEHSPKQVKDNLIHRSAQILACYRKHCTSPTSA 992
            .|.|.:::|||:...|:.|.:...|..|..:.:..|....:|.|::.....|:.|.. ..|....
Human  1029 CLPVVSSLADVYAGVDVQAAICLLANMAVDRSVSSSLSDARDALVNAVVDSLSAYGS-TVSNLQH 1092

  Fly   993 GQLILPECLKLLPLYASCLLKNDAISGGSDMTLDDRSYVIQFILSMDLNQSVSYLYPRFIPIHNV 1057
            ..|:.|..|||.|||...|||..|...|:...||||.|.:..|.|..|...:..::|....|..:
Human  1093 SALMAPSSLKLFPLYVLALLKQKAFRTGTSTRLDDRVYAMCQIKSQPLVHLMKMIHPNLYRIDRL 1157

  Fly  1058 VPE------ETDLPTP--VRCTHEKTQEDGAYILENGVHLFVWLGQALSPDFVQSVFGVQGLQQI 1114
            ..|      :..:|.|  .:.:.||...:||::::.|...::|:|:....:|::.|.|......|
Human  1158 TDEGAVHVNDRIVPQPPLQKLSAEKLTREGAFLMDCGSVFYIWVGKGCDNNFIEDVLGYTNFASI 1222

  Fly  1115 ALERFNIVPETPLAKRIHGILEQIMKERSRYMRITWLRQNDKLESV--------------FRHFL 1165
            . ::...:||          |:.:..||:|.. |||||.:..|..:              |:| |
Human  1223 P-QKMTHLPE----------LDTLSSERARSF-ITWLRDSRPLSPILHIVKDESPAKAEFFQH-L 1274

  Fly  1166 VEDRGTDGSASYVDFLCHMHKEI 1188
            :||| |:.:.||.:||.|:.::|
Human  1275 IEDR-TEAAFSYYEFLLHVQQQI 1296

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sec24CDNP_001259918.1 PRK12323 <119..321 CDD:481241 54/236 (23%)
COG5028 395..1190 CDD:227361 253/824 (31%)
SEC24BNP_001287742.1 COG5028 584..1289 CDD:227361 232/742 (31%)

Return to query results.
Submit another query.