DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG4270 and crispld1b

DIOPT Version :10

Sequence 1:NP_608663.1 Gene:CG4270 / 33408 FlyBaseID:FBgn0031407 Length:170 Species:Drosophila melanogaster
Sequence 2:NP_956764.2 Gene:crispld1b / 393442 ZFINID:ZDB-GENE-040426-1204 Length:509 Species:Danio rerio


Alignment Length:178 Identity:43/178 - (24%)
Similarity:72/178 - (40%) Gaps:36/178 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 RGQDTKGNNELFLKEVFNTTNKYRAMHGCPAVTI-----NAALNKLAQEWANHLRDQNTMAHRPN 79
            ||:.....:::.|  :.:..||.|.....||..:     :..|.:.|:.||:..    ...|.|:
Zfish    53 RGKRAISQSDMQL--ILDLHNKLRGQVYPPASNMEYMVWDTELERSAEHWAHTC----LWEHGPS 111

  Fly    80 ---PKYGENIFLSGGMDVTGDLPVEMWYREINSYDFNKAQFV----------PTAGHFTQLIWKS 131
               .:.|:|:....|.|......|:.||.|:..:.:...|..          |...|:|||:|.:
Zfish   112 HLLTRIGQNLGAHWGRDRPPTFHVQAWYDEVRDFSYPYPQECNPHCPYRCSGPVCTHYTQLVWAT 176

  Fly   132 SVEMGSGV----------ARKADRTWVVCNYNPPGNVVG--LFKDNVP 167
            |.::|..:          ...|...::||||:||||..|  .:|...|
Zfish   177 SNKIGCAINVCYNMNVWGMIWAKAVYLVCNYSPPGNWWGHAPYKHGTP 224

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4270NP_608663.1 CAP_GAPR1-like 31..158 CDD:349401 37/154 (24%)
crispld1bNP_956764.2 None

Return to query results.
Submit another query.