DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG4270 and glipr2

DIOPT Version :9

Sequence 1:NP_608663.1 Gene:CG4270 / 33408 FlyBaseID:FBgn0031407 Length:170 Species:Drosophila melanogaster
Sequence 2:XP_021327299.1 Gene:glipr2 / 325699 ZFINID:ZDB-GENE-030131-4424 Length:543 Species:Danio rerio


Alignment Length:168 Identity:67/168 - (39%)
Similarity:90/168 - (53%) Gaps:11/168 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 VAPIPKTHERPPGPRGQDTKGNNELFLKEVFNTTNKYRAMHGCPAVTINAALNKLAQEWANHLRD 70
            |..:|...|:|. |.|:    .:..|..|...|.|.||..||.|.:|||..|::.||:||.||..
Zfish   177 VPSVPHIAEKPT-PEGK----ADSSFEAEFLQTHNAYRKHHGAPPLTININLSRSAQKWAEHLLS 236

  Fly    71 QNTMAHRPNPKYGENIFL---SGGMDVTGDLPVEMWYREINSYDFNKAQFVPTAGHFTQLIWKSS 132
            ..|:.| .|..||||::.   |....:||...||.||.||..|:|::..|....|||||::||.|
Zfish   237 TRTLMH-SNGDYGENVYYAYSSANKKLTGREAVESWYNEIKEYNFSRPGFTSKTGHFTQVVWKDS 300

  Fly   133 VEMGSGVARKADRTWVVCNYNPPGNV--VGLFKDNVPP 168
            .|:|.|:|.....::||..|.|.||:  .|.|:.||.|
Zfish   301 KELGVGLATDGSTSFVVGQYLPGGNITNAGYFERNVLP 338

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG4270NP_608663.1 SCP_GAPR-1_like 31..158 CDD:240182 55/129 (43%)
glipr2XP_021327299.1 SCP_GAPR-1_like 5..135 CDD:240182
SCP_GAPR-1_like 196..326 CDD:240182 55/130 (42%)
SCP_GAPR-1_like 397..528 CDD:240182
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582478
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG2340
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1528782at2759
OrthoFinder 1 1.000 - - FOG0001021
OrthoInspector 1 1.000 - - otm26149
orthoMCL 1 0.900 - - OOG6_101367
Panther 1 1.100 - - O PTHR10334
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2242
SonicParanoid 1 1.000 - - X35
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1110.740

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